Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04507 ATGGATTTCGACGACCACCCCTTCAACCCTCCACCACCCACCACCAAGGGAAACTACAAAGAGTGCCTCAAGAACCACGCCGTCGGAATCGGCGGCCACGCGCTCGACGGCTGCGGCGAGTTCATGGCGGCGGGCGCCGAGGGCACCCTCGACGCCCTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGGAAGGACCCCGCCGAGAGCTTCGTTCAGCAGCGCCGCCACCGGCCGCAGCCGCAGTTCGCGGCGGCCTTCTACCGGGCCCCGGCTGGGTACCTGCAGGTGGTGGGGCCGCAGCGTGGAGGCCTTGCCACGCTGGCACTCCCGTCCACGTCAGGTGCGGGCGGTGGGGCCCAGAGCCCGGAGGAGGAGCAGGAAGATGTGTCGGAGCCAAGTGGTGGTGGTGGTGGTTGCGGGTCCCACAAAAAGAGGTTCAGAACTAAGTTCTCTCTTGAACAGAAAGACAAAATGCTCGCTTTCGCTGAAAAACTCGGTTGGAGGATTCAGAAGCACGACGAGACTCTCGTGCAGGACTTTTGCTCCCAAACTGGCCTTCAGCGTCACGTCCTCAAGGTTTGGATGCATAACAACAAACACACCCTTGGTAAGAAGCCCTAG 630 0.6222 MDFDDHPFNPPPPTTKGNYKECLKNHAVGIGGHALDGCGEFMAAGAEGTLDALKCAACNCHRNFHRKDPAESFVQQRRHRPQPQFAAAFYRAPAGYLQVVGPQRGGLATLALPSTSGAGGGAQSPEEEQEDVSEPSGGGGGCGSHKKRFRTKFSLEQKDKMLAFAEKLGWRIQKHDETLVQDFCSQTGLQRHVLKVWMHNNKHTLGKKP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04507 209 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 205 - -
Phac3g04507 209 NCBIfam homeobox domain, ZF-HD class 146 202 IPR006455 -
Phac3g04507 209 SUPERFAMILY Homeodomain-like 133 207 IPR009057 -
Phac3g04507 209 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 18 68 IPR006456 -
Phac3g04507 209 FunFam Zinc-finger homeodomain protein 2 139 207 - -
Phac3g04507 209 Pfam ZF-HD protein dimerisation region 18 68 IPR006456 -
Phac3g04507 209 Gene3D - 132 207 - -
Phac3g04507 209 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 19 68 IPR006456 -
Phac3g04507 209 MobiDBLite consensus disorder prediction 110 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04507 Phac-Chr3 43085609 43086490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04507 16 205 ZF-HD Transcription Factor Family AT4G24660 53.030 1.85e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac3g04507 ZF-HD_dimer 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04507 - - gmx:100798992 291.197