Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04505 ATGGAAGAGAGCATTGACCCTGCAACCTCAAGCCTTCTGTGTCTGGAAAACAATGACATGTGCTTTGATGATTTTGACTGTAATGTTGCAGATGAGTCTCCTTACTGGGACCGCAAAAATCCTAACTTTAACAATCAGTGTCTGATTGAGGACAATCTTGGATTGGATTCTCCTGTACTGAGTGATGAAATTGTTTTGGGTTTGGTTGGGAAGGAGAGGGATCATTTGCCCCGGGATGATTACCTCCAGAGGCTGCTTGGTGGGGACTTGGACTTGAGTGTTAGGAGGCAGGCTCTTGATTGGATTTGGAAGGCTCATGCACACTATGATTTTGGACCCTCTAGCTTATGTCTATCTGTGAACTACTTGGATCGGTTCCTATCGGTCTATGAATTACCAGGAGGCAACAGTTGGAGTGCACAACTGTTAGCTATAGCATGTCTGTCAATTGCTACCAAAATGGATGAGATTAAAGTGCCTTCTTGCATAGATATACAGGTTGGAGAACCTAAGTTTCTATTTGAAGCTAAAACCATTCAAAGAATGGAACTACTGGTATTAAGCACATTGAAATGGAAAATGCAAGCTTTAACTCCATTTTCCTTCGTAGACTACTTCCTCAAGAAGATCACTTGTGACCAACTTCTAGTAAGGTCATCCATTCTGAGATCAGTTGGGCTCATCCTTGACATAATTACATGTGTCAATTTCTTGGAATTCAAGCCTTCTGAAATTGCTGCAGCAGTGGCAATTTCTGTGTCAAGAAAATTTCAAGCAGAAGAGATTGACGAAGCTTTAACATGTTTTGTGATTGTAGGAAAGGAAAGAATTCTGAAGTGTCTTGAATTGATTAGAGATTTGCCTTTGATCCAAGCTTCTACTAATTTGGGCAGCAACTTAGCACCATTGGTGCCTCAAAGCCCTATTGGGGTGCTGGATGCTGCATGCTTGATCTCTATTAGTGATGAATTAACCCTTGGATTTTCTACAGATTCTTCTCTTGATACTCCAAATTCTAAGAGGATGAAATCTTGTTCTGACCCTCTTGATGGGAATTTCAAGTCATGA 1068 0.411 MEESIDPATSSLLCLENNDMCFDDFDCNVADESPYWDRKNPNFNNQCLIEDNLGLDSPVLSDEIVLGLVGKERDHLPRDDYLQRLLGGDLDLSVRRQALDWIWKAHAHYDFGPSSLCLSVNYLDRFLSVYELPGGNSWSAQLLAIACLSIATKMDEIKVPSCIDIQVGEPKFLFEAKTIQRMELLVLSTLKWKMQALTPFSFVDYFLKKITCDQLLVRSSILRSVGLILDIITCVNFLEFKPSEIAAAVAISVSRKFQAEEIDEALTCFVIVGKERILKCLELIRDLPLIQASTNLGSNLAPLVPQSPIGVLDAACLISISDELTLGFSTDSSLDTPNSKRMKSCSDPLDGNFKS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04505 355 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Phac3g04505 355 Pfam Cyclin, C-terminal domain 198 288 IPR004367 -
Phac3g04505 355 FunFam D2/4-type cyclin 78 190 - -
Phac3g04505 355 Gene3D - 78 195 - -
Phac3g04505 355 CDD CYCLIN_AtCycD-like_rpt2 198 284 - -
Phac3g04505 355 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Phac3g04505 355 Gene3D - 68 282 - -
Phac3g04505 355 SUPERFAMILY Cyclin-like 59 194 IPR036915 -
Phac3g04505 355 PANTHER CYCLINS 63 285 IPR039361 -
Phac3g04505 355 SUPERFAMILY Cyclin-like 179 286 IPR036915 -
Phac3g04505 355 SMART Cyclin_C_2 197 320 IPR004367 -
Phac3g04505 355 Pfam Cyclin, N-terminal domain 70 194 IPR006671 -
Phac3g04505 355 MobiDBLite consensus disorder prediction 332 355 - -
Phac3g04505 355 FunFam D6-type cyclin 191 282 - -
Phac3g04505 355 SMART cyclin_7 100 188 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04505 Phac-Chr3 43059297 43061944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04505 42 326 Core Cell Cycle Gene Families AT2G22490 48.026 5.82e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04505 K18810 - gmx:100800570 501.516