Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04492 ATGTGGCATTGCGCACTTCATCACTGTGTCACGAGTCCTTTGACTGTTTCTACAGTGTACTTGGGTGGATATGACAAGGAAGAGAAGGCTGCGAGAGCTTATGATTTAGCAGCTATCAAGTACTGGGGATCAACAGCAACCACCAACTTTCCTATTTGCACTTATACAAAGGAATTGGAAGAGATGAAATATGCAGGAAAACAAGAATTCATTGCATCACTGCGCAGGAAAAGTAGTGGGTTTTCAAGGGGAGCTTCTGCATTCAGGGGTGTTACAAGGCATCATCAACAGGGTAGATGGCAAGCAAGAATTGGCCGAGTTGCTGGAAACAAGGATCTATACCTGGGAACATTTGCAACTGAAGAGGAAGCTGCAGAGGCATATGATATTGCAGCCATAAAGTTCAGAGGTGCAGGTGCTGTAACCAATTTTGAGATGAGCAGATATGATGTGGAGAGTATACTGAATAGCTCTCTTCCAGTTGGTGGGGTAGCAAAACGCATGAAGCTTTCTCCAGAATTGGAGAACAATGCTTTTGTTGGTAGTACTAATGAACAACTTCAGCACACAGAAGAGAGTAGCACCATCAATTTCTCTGCCATTCAGCCAATTGCATCTATACCATATGATTCTGCAAACTCATGTTACCCTCAGAACCTCTTCCACCATTTTCATGCTTCAAACAGTGGAAGTAGCACAGCACAAGAGTCTGCTGCCATTGTGACCAATGCAACTGCACTGAGCATCCTTCCTCCTCCACCAGTTCCTGAGTTCTTTTTATGGCCACCTCAGTCCTTTTAA 801 0.4419 MWHCALHHCVTSPLTVSTVYLGGYDKEEKAARAYDLAAIKYWGSTATTNFPICTYTKELEEMKYAGKQEFIASLRRKSSGFSRGASAFRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGAGAVTNFEMSRYDVESILNSSLPVGGVAKRMKLSPELENNAFVGSTNEQLQHTEESSTINFSAIQPIASIPYDSANSCYPQNLFHHFHASNSGSSTAQESAAIVTNATALSILPPPPVPEFFLWPPQSF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04492 266 FunFam AP2-like ethylene-responsive transcription factor 86 147 - -
Phac3g04492 266 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Phac3g04492 266 Gene3D AP2/ERF domain 87 147 IPR036955 GO:0003700|GO:0006355
Phac3g04492 266 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 18 211 - -
Phac3g04492 266 Pfam AP2 domain 87 137 IPR001471 GO:0003700|GO:0006355
Phac3g04492 266 SUPERFAMILY DNA-binding domain 16 52 IPR016177 GO:0003677
Phac3g04492 266 SMART rav1_2 6 57 IPR001471 GO:0003700|GO:0006355
Phac3g04492 266 SMART rav1_2 87 151 IPR001471 GO:0003700|GO:0006355
Phac3g04492 266 ProSiteProfiles AP2/ERF domain profile. 87 145 IPR001471 GO:0003700|GO:0006355
Phac3g04492 266 ProSiteProfiles AP2/ERF domain profile. 1 51 IPR001471 GO:0003700|GO:0006355
Phac3g04492 266 SUPERFAMILY DNA-binding domain 86 147 IPR016177 GO:0003677
Phac3g04492 266 CDD AP2 19 52 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04492 Phac-Chr3 42965326 42970102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04492 19 266 AP2-EREBP Transcription Factor Family AT5G65510 62.948 1.79e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac3g04492 AP2 2.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04492 K09285 - gmx:100795280 370.933