Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04491 ATGGCCGGTGCCACAAATTGGCTTACGTTTTCGTTGACTCCCGTGGAAATGCTCAGATCCCCTGACTCTTCCTCTCACTGCTTCCTCGATAACTTTTATGCCACCAATGGGTGGACAAATTCCAAGGGATTGATGGATTCCGAGAGTGAAAACCAGCCACTTCTGGAGCCCAAAATGGAAGATTTTTTTGAGAACCAAACAGAGACTACCCAACAAGACGATTCTTCATTGACCCAAATTTACGATCATGGGTCTGCGTCTGTTTACTTCGGCGACCAGCAAGATCTGAACTTCATCCCTGACTTTAAAGCATTCCCTTCCACCAACTCCGGCTCCGAGTTGGATGACTCAGCCTCTGACAGGACCAATCGGGTTGCACCCGCTGAGTTAGGTGCCCATTTGGGAGAGTCATGCAAAGGAGCTTTGTCTTTATGTGACGCAGTTGCACATGAAAAGGCCATCATGGTTGCGGCGGAGTTTGATACACCGAAGAAGGTTTCTCATGCCATTGGCCAGCGAACTTCAATATACAGAGGGGTAACAAGGCATCGATGGACGGGTAGATATGAAGCCCATCTATGGGACAACACCTGTAGAAGAGAGGGTCAGGCCAGAAAGGGGCGTCAAGGTGGATATGACAAGGAAGAGAAGGCTGCGAGAGCTTATGATTTAGCAGCTATCAAGTACTGGGGATCAACAGCAACCACCAACTTTCCTATTTGCACTTATACAAAGGAATTGGAAGAGATGAAATATGCAGGAAAACAAGAATTCATTGCATCACTGCGCAGGAAAAGTAGTGGGTTTTCAAGGGGAGCTTCTGCATTCAGGGGTGTTACAAGGCATCATCAACAGGGTAGATGGCAAGCAAGAATTGGCCGAGTTGCTGGAAACAAGGATCTATACCTGGGAACATTTGCAACTGAAGAGGAAGCTGCAGAGGCATATGATATTGCAGCCATAAAGTTCAGAGGTGCAGGTGCTGTAACCAATTTTGAGATGAGCAGATATGATGTGGAGAGTATACTGAATAGCTCTCTTCCAGTTGGTGGGGTAGCAAAACGCATGAAGCTTTCTCCAGAATTGGAGAACAATGCTTTTGTTGGTAGTACTAATGAACAACTTCAGCACACAGAAGAGAGTAGCACCATCAATTTCTCTGCCATTCAGCCAATTGCATCTATACCATATGATTCTGCAAACTCATGTTACCCTCAGAACCTCTTCCACCATTTTCATGCTTCAAACAGTGGAAGTAGCACAGCACAAGAGTCTGCTGCCATTGTGACCAATGCAACTGCACTGAGCATCCTTCCTCCTCCACCAGTTCCTGAGTTCTTTTTATGGCCACCTCAGTCCTTTTAA 1365 0.4637 MAGATNWLTFSLTPVEMLRSPDSSSHCFLDNFYATNGWTNSKGLMDSESENQPLLEPKMEDFFENQTETTQQDDSSLTQIYDHGSASVYFGDQQDLNFIPDFKAFPSTNSGSELDDSASDRTNRVAPAELGAHLGESCKGALSLCDAVAHEKAIMVAAEFDTPKKVSHAIGQRTSIYRGVTRHRWTGRYEAHLWDNTCRREGQARKGRQGGYDKEEKAARAYDLAAIKYWGSTATTNFPICTYTKELEEMKYAGKQEFIASLRRKSSGFSRGASAFRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGAGAVTNFEMSRYDVESILNSSLPVGGVAKRMKLSPELENNAFVGSTNEQLQHTEESSTINFSAIQPIASIPYDSANSCYPQNLFHHFHASNSGSSTAQESAAIVTNATALSILPPPPVPEFFLWPPQSF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04491 454 SUPERFAMILY DNA-binding domain 274 335 IPR016177 GO:0003677
Phac3g04491 454 Pfam AP2 domain 176 231 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 Pfam AP2 domain 275 325 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 SUPERFAMILY DNA-binding domain 175 240 IPR016177 GO:0003677
Phac3g04491 454 CDD AP2 175 240 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 PRINTS Ethylene responsive element binding protein signature 315 335 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 PRINTS Ethylene responsive element binding protein signature 177 188 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 ProSiteProfiles AP2/ERF domain profile. 275 333 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 SMART rav1_2 176 245 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 SMART rav1_2 275 339 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 Gene3D AP2/ERF domain 275 335 IPR036955 GO:0003700|GO:0006355
Phac3g04491 454 Gene3D AP2/ERF domain 176 241 IPR036955 GO:0003700|GO:0006355
Phac3g04491 454 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 53 380 - -
Phac3g04491 454 FunFam AP2-like ethylene-responsive transcription factor 274 335 - -
Phac3g04491 454 ProSiteProfiles AP2/ERF domain profile. 176 239 IPR001471 GO:0003700|GO:0006355
Phac3g04491 454 FunFam AP2-like ethylene-responsive transcription factor ANT 175 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04491 Phac-Chr3 42965326 42970102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04491 57 454 AP2-EREBP Transcription Factor Family AT5G65510 52.434 5.09e-125 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Phac3g04491 AP2 4.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04491 K09285 - gmx:100814405 572.778