Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04489 ATGGAGAAATTAGAGAAAAAGGGAAAAGAGATGAAAGAAAAGAAATGGACCCGGAAACTGGAGTTACCGTCAATAATGGGGAACCCCAAGAAAGAGGTTGCGTGTGACGACGACGTATTGGGGTCGCCGAGGGATGTATTTGGGGTTCCCGTTTCGGGGACGGATTCGGACAGCACGGGGAGCGGCAACTACGGCGCGCTTGGGTCGCCCGTAACTGGCCCGAATCGGGGCCAAGGGAGAGACGCGCAGAACCAGCAATGGAAGACGATGATGGACGTGTTGAGGTTCAAGTCCGTTAGAAGATTCTCGACGATTCCTCTGCTCGGGGCGAGTTACGAGATCTCGCGCCGGAGCCTGAGGAACAAGTTGGCGCGTATTCGACCCGCCAATGACGATGATGATTTAGATGTCTCTATTGACTTTGACGGCATTCCCACCAAGCCTTCTTGGAAGAACTTCAATTACGCTGAACTCGTCGCTGCAACCGACGATTTCAACCCTGAGAACATGCTCGGAAAAGGTGGTCATGCTGAAGTGTACAAAGGATGCTTACCAGATGGTCGAATAGTAGCAGTTAAGAGGCTAATGAGGAATGAAAAGGAAATTGAGGACACAGTCGGTGATTTCTTGACAGAGCTTGGAATCATTGCTCACATTAACCACCCCAATGCAACACGTTTGATAGGGTTTGGGATCGACCAAGGTCTCTTTTTTGTTCTACAATTGGCCCCACATGGCAGCCTTGCCTCTATGCTCTTTGGACCTGAATGTCTAGAGTGGAATATAAGGTTTAAAGTAGCTGTTGGGGTAGCAAAAGGATTGCACTATCTCCACCACGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACCACAGTAATGAAGCTGAGATTTCAGACTTTGGATTAGCAAAGTGGCTCCCAGATAAGTGGGCTCACCATGTTGTCTTCCCAATAGAAGGCACGTTCGGATATTTAGCTCCGGAGTACTTCATGCATGGAATAGTGGATGAGAAAATTGATGTTTTTGCATTTGGGGTTTTGTTACTCGAGCTCATAACAGGTCGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATCTGGGCCAAACCATTTCTGGATGCAAAGTTGATCAAAGAAATGGTAGACCCCAGATTAGGAGACAAGTATGATCTGGCAGAAATGAAGTGTTGCATGGCAACGGCTTCCTTGTGTATCCATCACATGTCCTCCAAGAGGCCATACATGGATCAGGTTGTGCAGCTACTGAAAGGAGAAGAGGTGCCAATAGAACTGAACCAAAATTCACCTAGTCCAAGATCACTGTTGGTAGATGCATGTGACCTGGAAGATTACACTTGCTCAAACTATTTGAACGACCTGAATCGGCACAGGCAATTACTGATGGAGTGA 1440 0.4708 MEKLEKKGKEMKEKKWTRKLELPSIMGNPKKEVACDDDVLGSPRDVFGVPVSGTDSDSTGSGNYGALGSPVTGPNRGQGRDAQNQQWKTMMDVLRFKSVRRFSTIPLLGASYEISRRSLRNKLARIRPANDDDDLDVSIDFDGIPTKPSWKNFNYAELVAATDDFNPENMLGKGGHAEVYKGCLPDGRIVAVKRLMRNEKEIEDTVGDFLTELGIIAHINHPNATRLIGFGIDQGLFFVLQLAPHGSLASMLFGPECLEWNIRFKVAVGVAKGLHYLHHDCPRRIIHRDIKASNILLNHSNEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKIDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPFLDAKLIKEMVDPRLGDKYDLAEMKCCMATASLCIHHMSSKRPYMDQVVQLLKGEEVPIELNQNSPSPRSLLVDACDLEDYTCSNYLNDLNRHRQLLME* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04489 479 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 244 446 - -
Phac3g04489 479 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g04489 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Phac3g04489 479 Pfam Protein kinase domain 168 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04489 479 ProSiteProfiles Protein kinase domain profile. 165 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04489 479 Gene3D Phosphorylase Kinase; domain 1 139 240 - -
Phac3g04489 479 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
Phac3g04489 479 MobiDBLite consensus disorder prediction 1 84 - -
Phac3g04489 479 MobiDBLite consensus disorder prediction 52 68 - -
Phac3g04489 479 PANTHER OS08G0249100 PROTEIN 76 443 IPR046958 -
Phac3g04489 479 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 140 242 - -
Phac3g04489 479 Gene3D Transferase(Phosphotransferase) domain 1 244 445 - -
Phac3g04489 479 SMART serkin_6 165 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04489 479 SUPERFAMILY Protein kinase-like (PK-like) 150 453 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04489 Phac-Chr3 42955817 42959818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04489 125 432 Trihelix Transcription Factor Family AT5G38560 42.320 2.96e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac3g04489 Pkinase 5.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04489 - - gmx:100794225 774.622