Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04476 ATGGCTGTTACACCAGGACTCGAGCATTCAAGGAAGGCTTTTGGATGGGCAGCTAGAGACACATCTGGGGTTCTCTCCCCCTTCAACTTCACCAGAAGGGAAACAGGAGAGAAAGATGTAGCAATCAAAGTGTTGTTCTGCGGTATATGTCACACCGACCTCCATAATGCAAAGAGTGAATGGGGCCAATCCTTTTATCCACTCGTACCCGGGCACGAGATTGCAGGTGAGGTGATAGAGGTAGGAAGCAAGGTAGAGAGGTTCAAGGTGGGAGAGAAGGTGGGTGTGGGGTGCATGGTTCAATCCTGTAGGTCATGCGGCAACTGTAGTGATAATCTTGAGAATTTCTGTTCAAAATTGGTTCTGACGTATGGATCGAAGGATATTGATGGAAGCATCACACAAGGAGGGTACTCTGACATGGTTGTTGTAGATGAACACTTTGTGATCAGAATTCCTGATGGCTTACCTCTCGAGGCTGCTGCTCCTCTCTTATGTGCTGGGATCACTGTCTATAGCCCTCTCTTATATTTTGGACTTGGCAAACCAGGGTTGCATGTGGGTGTGGTTGGTCTTGGTGGCGTTGGTCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACTGTAATCAGCACATCTCCCAACAAAAAGAAGGAAGCCATTGAGCATCTTGGAGCTGACTCATTTCTCATCAGTCGTAATCAGGATGAGATGGAGGCTGCAAAGGGCACCCTGGATGGTATAATAGACACAGTTTCTGCAGTCCATCCTCTGCTACCTCTGATTAATTTGTTGAAGACTAATGGGAAGCTTGTCATAGTTGGTCTACCTGATAAGCCTTTGGAACTACCCATCTTTCCTTTACTAGATAGAAAGAGTGTAGCTGGGAGTTGCATTGGAGGAATGAAGGAGACTCAAGAAATGATTAACTATGCTGCCAAATACGATATAAAGCCTGATATTGAGATTATTCCTATTGATTATGTAAACACGGCAATGGAGCGTCTCCTCAAATCAGATGTCAAATATCGATTTGTTATTGACATTGGGAACACACTGAAGCACGAGATTGCAGGTGAAGTGATAGAGGTAGGAAGCAAAGTTGGAAAGTTCAAAGTGGGTGAGAAGGTGGGTGTGGGGTGCATGGTTCAATCTTGTAGATCATGCAAAAGCTGTGGTGAGAATCTTGAGAATTACTGTCCAGGAATGGTTCTGACGTATGGATCGAAGGATATTGATGGAAGCATCACACAAGGAGGGTACTCTGATATGGTGGTTGTAGATGAACACTTTGTGATCAGCATTCCTGATGGCCTACCTCTTGAGGCTGCTGCTCCCCTCTTATGTGCTGGGATCACTGTGTATAGCCCTCTCTTATATTTTGGACTTGCAAAGCCAGATCTGCATGTGGGTGTTGTTGGTCTTGGTGGTGTTGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACTGTAATCAGCACATCTCCCAACAAAAGGAAGGAAGCCATTGAGCATCTTGGAGCTGACTCATTTGTGGTCAGTCGAGAGCAAGATCAAATGCAGGCTGCAAAGGGTAGCTTGGATGGTATAATAGACACAGTTTCTGCAGTCCATCCTCTGCTCCCTCTGCTTGAATTGTTGAAGACTCATGGGAAGCTTGTCATTGTTGGTTTACCTGATAAGCCTTTGGAGCTATCTGCCTTTCCTATAGTTGGAGCGAGAAAGATGGTAGCTGGCAGTTGCATTGGAGGAATAAAGGAGACGCAAGAAATGATTAATTTTGCTGCCAAACACGATGTAAAGCCTGATATTGAGATTGTTTCTATTGATTATTTGAACAAGGCAATGGAGCGTCTGGTGAAAGCAGATGTGAAATATCGATTTGTTATTGACATTGGCAACACACTGAAGTCAAGCTCTTGA 1944 0.4506 MAVTPGLEHSRKAFGWAARDTSGVLSPFNFTRRETGEKDVAIKVLFCGICHTDLHNAKSEWGQSFYPLVPGHEIAGEVIEVGSKVERFKVGEKVGVGCMVQSCRSCGNCSDNLENFCSKLVLTYGSKDIDGSITQGGYSDMVVVDEHFVIRIPDGLPLEAAAPLLCAGITVYSPLLYFGLGKPGLHVGVVGLGGVGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFLISRNQDEMEAAKGTLDGIIDTVSAVHPLLPLINLLKTNGKLVIVGLPDKPLELPIFPLLDRKSVAGSCIGGMKETQEMINYAAKYDIKPDIEIIPIDYVNTAMERLLKSDVKYRFVIDIGNTLKHEIAGEVIEVGSKVGKFKVGEKVGVGCMVQSCRSCKSCGENLENYCPGMVLTYGSKDIDGSITQGGYSDMVVVDEHFVISIPDGLPLEAAAPLLCAGITVYSPLLYFGLAKPDLHVGVVGLGGVGHMAVKFAKAFGAKVTVISTSPNKRKEAIEHLGADSFVVSREQDQMQAAKGSLDGIIDTVSAVHPLLPLLELLKTHGKLVIVGLPDKPLELSAFPIVGARKMVAGSCIGGIKETQEMINFAAKHDVKPDIEIVSIDYLNKAMERLVKADVKYRFVIDIGNTLKSSS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04476 647 FunFam Cinnamyl alcohol dehydrogenase 453 609 - -
Phac3g04476 647 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Phac3g04476 647 Pfam Alcohol dehydrogenase GroES-like domain 352 437 IPR013154 -
Phac3g04476 647 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Phac3g04476 647 Gene3D - 16 352 - -
Phac3g04476 647 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Phac3g04476 647 FunFam Cinnamyl alcohol dehydrogenase 167 322 - -
Phac3g04476 647 CDD CAD1 358 638 IPR047109 GO:0016616
Phac3g04476 647 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Phac3g04476 647 Gene3D - 357 639 - -
Phac3g04476 647 SUPERFAMILY GroES-like 20 184 IPR011032 -
Phac3g04476 647 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 442 608 IPR036291 -
Phac3g04476 647 CDD CAD1 14 351 IPR047109 GO:0016616
Phac3g04476 647 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
Phac3g04476 647 PANTHER ALDEHYDE REDUCTASE 8 355 IPR047109 GO:0016616
Phac3g04476 647 SUPERFAMILY GroES-like 353 469 IPR011032 -
Phac3g04476 647 Pfam Zinc-binding dehydrogenase 194 314 IPR013149 -
Phac3g04476 647 Pfam Zinc-binding dehydrogenase 480 603 IPR013149 -
Phac3g04476 647 Gene3D - 453 609 - -
Phac3g04476 647 Gene3D - 167 322 - -
Phac3g04476 647 FunFam Uncharacterized protein 16 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04476 Phac-Chr3 42837410 42848297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04476 358 644 Monolignol Biosynthesis Gene Families AT4G37990 67.596 8.07e-117 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04476 K23232 - qlo:115950210 829.32