Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04474 ATGGCTTTCTTCACCTCTTCTTCATGCTGTAATCAAACCCAAAAACAAACATCTTTCTTCATATGTATCTTCATCTTCGCCACTCTGTTCCATGACACTGTTGAGTCTGTTTCCTTCAACTTTTCCAGCTTCCAGCAGTCAAACTTGAACAACCAAATAGACTTCGCGGGTGATGCTTTTCCCTCAAACGGTGTTCTTCAGCTCACGAAGAACCAACTCGATGGCCCCGTGACAGACAGCGTTGGTCGAGCCTCGTATGCACAACCAGTGAGGCTTTGGGATCAAAAAACAAAGAAGCTCACCGATTTCACAACCCATTTCTCTTTTGTCATAAAAGCTGTGAACGAGTCAATTGTTGGTGATGGCTTGGCCTTCTTCCTTGCACCGTTTGATTCTTCCATTCCCAACAACTCTGCTGGTGGGTTCCTTGGCCTGTTCAGCCCGGATTCTGCATTCGACACTAAGAAAAATCAGTTGGTGGCAGTTGAGTTCGACAGTTTCAAGAACGAATGGGATCCGAGCTCAGATCACGTAGGGATCAATGTAAATTCCATCCAATCAGTTGCAAACGTGAGTTGGAGGAGCAGCATTAAGAATGGGTCTGTTGCTAATGCTTGGGTATGGTACAACTCCACATCCAAAAATCTCTCTGTTTTTCTTACTTATGCTGAGAATCCAACCTTCAATGGCAGTTCTAGTGTTTCTTACGTTATTGATTTCAGGGACGTATTGCCAGAGTTTGTTAGAATAGGGTTTTCTGCAGCAACGGGTACATGGGTTGAGATACACAACATTTTGCTTTGGTCATTCAGTTCAACCTTGGATGGGGATGGTAGGAAAAAATCCAAGGTTGGCTTAGTGGTTGGTATCAGTGTTGGTTTGGGTTGTTTAGTTGGTCTTGTAGGTCTATTATGGTTTACCTTCTGGAGAAGGAGAAATAGACTAAGGGGTGTAAACGAGGACATCATTGATGTTGATGCTTCTATAGATGATGAGTTTGAGAGAGGGACTGGTCCAAAGAGGTTCAGCTACCGGGAACTAAGCAACGCAACCAACAACTTTGCTGAAGAAGGGAAGCTAGGACAAGGAGGGTTTGGAGGAGTTTACAAAGGTTTGATTGTGGATTCCAACCTTGAAGTGGCAGTGAAGAGGGTTTCCAAAGGGTCAAAGCAAGGGAAAAAGGAGTACATATCAGAAGTGAGAGTTATCAGCCGGCTGAGACACAGAAACCTGGTTCAACTCATAGGGTGGTGCCATGAACAGAGTGAGCTCCTTCTTGTTTATGAATTCATGCCTAATGGAAGCCTTGATTCTCATCTTTTTGGAAATAGAGTCATGCTTTCTTGGGGGGTGAGATACAAGGTGGCCTTAGCCCCTTTGCCAAGTCTTCCATCCAAGTTGCCAGTGCCAATGTACTTTGCACCTCCCATTGATATAAGCCAATTCTCCTACACTTCATCTCTCGTCACAGGCACAACCAAAGAATCGTCCACATACTCTTCAACGTCTACAGGGTCTGGAAAGTCTCCACTATTGCAATGA 1542 0.4455 MAFFTSSSCCNQTQKQTSFFICIFIFATLFHDTVESVSFNFSSFQQSNLNNQIDFAGDAFPSNGVLQLTKNQLDGPVTDSVGRASYAQPVRLWDQKTKKLTDFTTHFSFVIKAVNESIVGDGLAFFLAPFDSSIPNNSAGGFLGLFSPDSAFDTKKNQLVAVEFDSFKNEWDPSSDHVGINVNSIQSVANVSWRSSIKNGSVANAWVWYNSTSKNLSVFLTYAENPTFNGSSSVSYVIDFRDVLPEFVRIGFSAATGTWVEIHNILLWSFSSTLDGDGRKKSKVGLVVGISVGLGCLVGLVGLLWFTFWRRRNRLRGVNEDIIDVDASIDDEFERGTGPKRFSYRELSNATNNFAEEGKLGQGGFGGVYKGLIVDSNLEVAVKRVSKGSKQGKKEYISEVRVISRLRHRNLVQLIGWCHEQSELLLVYEFMPNGSLDSHLFGNRVMLSWGVRYKVALAPLPSLPSKLPVPMYFAPPIDISQFSYTSSLVTGTTKESSTYSSTSTGSGKSPLLQ* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04474 513 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Phac3g04474 513 FunFam L-type lectin-domain containing receptor kinase IX.1 339 430 - -
Phac3g04474 513 MobiDBLite consensus disorder prediction 493 513 - -
Phac3g04474 513 Gene3D - 34 287 - -
Phac3g04474 513 ProSiteProfiles Protein kinase domain profile. 354 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04474 513 Gene3D Phosphorylase Kinase; domain 1 339 430 - -
Phac3g04474 513 PANTHER - 52 456 - -
Phac3g04474 513 Pfam Legume lectin domain 37 278 IPR001220 GO:0030246
Phac3g04474 513 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 275 IPR013320 -
Phac3g04474 513 Pfam Protein kinase domain 355 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04474 513 CDD lectin_legume_LecRK_Arcelin_ConA 37 274 IPR001220 GO:0030246
Phac3g04474 513 ProSitePatterns Legume lectins alpha-chain signature. 244 253 IPR000985 -
Phac3g04474 513 SUPERFAMILY Protein kinase-like (PK-like) 339 457 IPR011009 -
Phac3g04474 513 ProSitePatterns Legume lectins beta-chain signature. 160 166 IPR019825 -
Phac3g04474 513 FunFam L-type lectin-domain containing receptor kinase IX.1 35 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04474 Phac-Chr3 42809523 42811571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04474 34 463 Receptor kinase-like Gene Family AT5G10530 45.270 2.86e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac3g04474 Lectin_legB 5.7e-72 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04474 - - pvu:PHAVU_003G287100g 842.802