Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04463 ATGTCTCCGCCTCTGTTGGTTAGTGAAGATGAAGGGCAGAGCAATGCCTCGATGGTAGCGTCTGCATCTTCACCATCCATGGAATGTTTCTCCCCACATGAGGCTAGATTCAAAGAACGCAATTACCTGGGATTCTCAGATTGCTCTTCGGTGGAAAGTTCTACTGTCCCGAGCTTGTCTAATGAGAAAAAGAACCTGAATTTGAAGGCTACTGAGTTGAGGCTGGGCCTTCCTGGATCCCAGTCACCTGAAAGGAATCCGGATCTTTTCCCATTGACCTCATCAAAACTTGACGAGAAACCACTGTTCCCTTTGCTTCCTACAAAGGATGGAATCTTTGCATTGTCCCAGAAAACTGTGGTCTCGGGCAATAAAAGGGGTTTTGCTGACACAATGGACACTGAGTTTCCTGGAAATGCAGGGATAAACATGATGCTATCACCTAAACCTTCTGGGATTCAGCCAACCACAGTGAAAGAACTTCCAAGCAAGGTGTTACAGGAACGTCCTTGTGCAGCAAATGGAACTGGTCTTAACCATACAGGAGCTTCTATCAGTGGCAGTGCACCTGCTTCTAAGGCACAAGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAACTCATTGGCCACCACTTCAAAGAACAATGATGAAGTAGATGGAAAAGCAGGTCCAGCCGCTCTCTTTGTGAAGGTCAGCATGGATGGTGCTCCCTATCTGAGGAAGGTAGATCTGAGAAATTATACAACATACCAGGAACTGTCTTCTGCCCTTGAGAAGATGTTCAGCTGTTTCACTCTAGGTCAATGTGGTTCCCATGGAGTGCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTGAAGGACCTCCTGCATGGTTCGGAATATGTACTTACTTATGAAGATAAAGATGGTGACTGGATGCTTGTTGGAGATGTACCGTGGGATATGTTCATTGACACATGCAAAAGGCTTAAAATCATGAAGGGTTCCGATGCCATTGGCTTAGCTCCAAGGGCCATGGAAAAATCCAGGAGCAGGAGCTAG 1047 0.4613 MSPPLLVSEDEGQSNASMVASASSPSMECFSPHEARFKERNYLGFSDCSSVESSTVPSLSNEKKNLNLKATELRLGLPGSQSPERNPDLFPLTSSKLDEKPLFPLLPTKDGIFALSQKTVVSGNKRGFADTMDTEFPGNAGINMMLSPKPSGIQPTTVKELPSKVLQERPCAANGTGLNHTGASISGSAPASKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKAGPAALFVKVSMDGAPYLRKVDLRNYTTYQELSSALEKMFSCFTLGQCGSHGVPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWDMFIDTCKRLKIMKGSDAIGLAPRAMEKSRSRS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04463 348 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 66 335 IPR003311 GO:0005634|GO:0006355
Phac3g04463 348 FunFam Auxin-responsive protein 223 340 - -
Phac3g04463 348 MobiDBLite consensus disorder prediction 7 28 - -
Phac3g04463 348 Pfam AUX/IAA family 71 339 IPR033389 -
Phac3g04463 348 MobiDBLite consensus disorder prediction 1 28 - -
Phac3g04463 348 ProSiteProfiles PB1 domain profile. 228 332 IPR000270 GO:0005515
Phac3g04463 348 Gene3D - 223 341 - -
Phac3g04463 348 SUPERFAMILY CAD & PB1 domains 227 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04463 Phac-Chr3 42721853 42725522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04463 230 342 B3 DNA Binding Superfamily AT1G30330 27.434 1.15e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac3g04463 AUX_IAA 3.4e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04463 K14484 - gmx:100500373 606.29