Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04437 ATGGCGTCCGATGCCTTCACCGACAAGAACATTGTCTTCAGGAAACTCAAGGCCAAGTCTGAAAATAAGATGTGTTTCGATTGCAATGCGAAGAACCCTACCTGGGCGTCCGTCACGTATGGGATCTTCCTCTGCATCGATTGCTCCGCCGTTCATCGAAGTCTCGGCGTGCACATCAGCTTCGTGAGGTCTACAAATTTAGACTCATGGAGTACTGAGCAATTAAAAATGATGAGCTTTGGAGGAAACAATCGTGCACAGGTTTTCTTTAAGCAACATGGTTGGACTGATGGTGGCAAAATAGAGGCTAAATTCACATCCAGAGCTGCAGATTTGTATAGGCAAATTCTTTCAAAGGAAGTGGCTAAAAGTATGGCTGAAGATGGAGGCTTGCCTTCATCACCTGTTGCTTCTCAGTCTTCCCAGGGTGTTAATGGGCTTCCTGAAGTCAGGACCAATGAAGTGCCAAAAGAAAACACTCGGGAGAAGCCTGAAAAGCCTGAGAGCACTTCTTCACCTAGGGCTTCTCACTCAGTAATTTCAAGTACTGTCAAGAAACCTATTGGTGCTAAAAAAGCTGGGAAGAGTGGGGGGCTTGGAGCTCGTAAACTCACTAAAAAGCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAAGCCCCTGCTCCTGTTCCATCCTCAACAAACAATATGCCTGCTGGACCATCTCCGACATCTCGGTTTGAGTATGTAGAAAATGTCCAATCATCTGAGTTGAACACTGGAGGTTCACATGTGATGAGTCATGTCTCTCCACCAAAGTCATCAAGCTTTTTTGCAGACTTTGGAATGGATGGTGGCTTTCCAAAGAAATCTGGGCCAAGCTCCTCCAAAGTGCAAATTCAGGAATCTGATGAGGCAAGAAGGAAGTTCTCAAATGCCAAATCTATTTCATCATCCCAATTTTTTGGGGATCATGCCAAAGCTACAGATTTGGATTCTCAAGCTTCTTTGTCTAAGTTTTCGGGTTCGAGTGCCATTTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAATGCCATTGATCTTACTGCCAGTGACCTCCTCAATCGATTATCTTTCCAGGCACAACAAGACATTTCTTCCCTTAAGAACATTGCAGGAGAAACTGGAAAGAAGCTCAGCACATTGGCCTCCACATTGATGACGGATCTTCAGGACCGAATCCTCTAA 1212 0.453 MASDAFTDKNIVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSTEQLKMMSFGGNNRAQVFFKQHGWTDGGKIEAKFTSRAADLYRQILSKEVAKSMAEDGGLPSSPVASQSSQGVNGLPEVRTNEVPKENTREKPEKPESTSSPRASHSVISSTVKKPIGAKKAGKSGGLGARKLTKKPSESLYEQKPEEAPAPVPSSTNNMPAGPSPTSRFEYVENVQSSELNTGGSHVMSHVSPPKSSSFFADFGMDGGFPKKSGPSSSKVQIQESDEARRKFSNAKSISSSQFFGDHAKATDLDSQASLSKFSGSSAISSADLFGDSRDNAIDLTASDLLNRLSFQAQQDISSLKNIAGETGKKLSTLASTLMTDLQDRIL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04437 403 SUPERFAMILY ArfGap/RecO-like zinc finger 12 125 IPR037278 -
Phac3g04437 403 MobiDBLite consensus disorder prediction 154 170 - -
Phac3g04437 403 MobiDBLite consensus disorder prediction 282 301 - -
Phac3g04437 403 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Phac3g04437 403 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Phac3g04437 403 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Phac3g04437 403 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Phac3g04437 403 CDD ArfGap_ArfGap2_3_like 8 123 - -
Phac3g04437 403 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Phac3g04437 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 5 403 - -
Phac3g04437 403 MobiDBLite consensus disorder prediction 222 240 - -
Phac3g04437 403 Gene3D Arf GTPase activating protein 1 136 IPR038508 -
Phac3g04437 403 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Phac3g04437 403 MobiDBLite consensus disorder prediction 133 148 - -
Phac3g04437 403 MobiDBLite consensus disorder prediction 126 240 - -
Phac3g04437 403 Pfam Putative GTPase activating protein for Arf 12 97 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04437 Phac-Chr3 42611807 42617141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04437 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 9.33e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04437 K12493 K11855 gmx:100789796 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04437 3 42611807 42617141 Phac3g04437 3 42611807 42617141 ECH