Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04433 ATGGCAGCTGTTGCCAACCCCAGAACTTGGATTCCATATATGAACAGCAAAGACTGTTCTCAAGGATTTTGTAGCTTGTATTGTCCACAGTGGTGTTACATAGTGTATCCTCCTCCTCCACCTTTTGAGTACCCTGATGATGATTCAAGCCCAAATTTCTCCCCTCTTGTCATTGCAATCATTGGAATCATGGCCACTGCTTTTCTTCTGGCTAGTTACTACACTCTCATATCCAAGTACTGTGGCCCCAGAGAGTCTGCACGCAGAGACCCAAATGAAAACTTGCAAGCCACTCACAATCCCTCTCTCCACGAACCATGGAACGCTTCAAGCACCGGTCTTGACGAGGCTCTGATCAAATCCATTGCAATTTTCAAGTACAAGAAAAGGGATGGTGGTTCTGTTGCAGTCACGGATTGTTCAGTTTGTCTGAGCGAGTTTGAAGACGATGAAAGTGTTAGACTGTTGCCAAAGTGCAGCCACGTTTTCCATGCCCCTTGCATTGACACTTGGCTCAAGTCTCACTCTAGCTGCCCTCTCTGTCGTGCTGCCATATTCACTTTCAACAACGGTTCTGTTCCTCGGGCTCATACCCCAGAGGAAGAGGCTCCTTCTTTAAGGAACAATGAAACTTCTTCTGAGAGTGAAAGTGTTGGAAGTGGCAACGAGTATGGAGTGGTGGTGATGTTGGAAGAAGAAGGCATACACCATGCCAGGGCTCATCCAAAGCCTGCATTGCGTGCTTTTAGTGACTTGAGTAGCTTTCAGGGAAGGCACAGAGTGATTGAGATAAGAGATGAAGTGTGTGAATCCGTTGGTAGGTCAGTGTCTATGGACCATTCGTTTCACAGGCATGAAGAGGAAGATTCATATGTGGAAGGGTGTTCTACCACTGAAGCTGGCCCATCAAAGAGATCACGCAGAGAGAGTTACAAAAGAAGGGTGTTGCATTGTGTGTTGAGTCCAATTGCAATGAAGAGATCGTTTTCCAGTCACAGATTCTCACTGGGCAAAAGTAGCAGAGCATGGCATGGAACTATACCCATCTGA 1050 0.4657 MAAVANPRTWIPYMNSKDCSQGFCSLYCPQWCYIVYPPPPPFEYPDDDSSPNFSPLVIAIIGIMATAFLLASYYTLISKYCGPRESARRDPNENLQATHNPSLHEPWNASSTGLDEALIKSIAIFKYKKRDGGSVAVTDCSVCLSEFEDDESVRLLPKCSHVFHAPCIDTWLKSHSSCPLCRAAIFTFNNGSVPRAHTPEEEAPSLRNNETSSESESVGSGNEYGVVVMLEEEGIHHARAHPKPALRAFSDLSSFQGRHRVIEIRDEVCESVGRSVSMDHSFHRHEEEDSYVEGCSTTEAGPSKRSRRESYKRRVLHCVLSPIAMKRSFSSHRFSLGKSSRAWHGTIPI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04433 349 SUPERFAMILY RING/U-box 139 188 - -
Phac3g04433 349 PANTHER RING-H2 FINGER PROTEIN ATL16 41 285 IPR044600 GO:0016567|GO:0016740
Phac3g04433 349 CDD RING-H2_EL5-like 139 182 - -
Phac3g04433 349 MobiDBLite consensus disorder prediction 205 220 - -
Phac3g04433 349 Pfam Ring finger domain 139 182 IPR001841 -
Phac3g04433 349 SMART FANCL_C_2 136 187 - -
Phac3g04433 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 186 IPR013083 -
Phac3g04433 349 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Phac3g04433 349 MobiDBLite consensus disorder prediction 192 221 - -
Phac3g04433 349 SMART ring_2 140 181 IPR001841 -
Phac3g04433 349 FunFam E3 ubiquitin-protein ligase ATL6 103 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04433 Phac-Chr3 42559554 42561409 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04433 1 233 C3H Transcription Factor Family AT3G03550 46.667 4.21e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04433 - - vun:114176645 576.244