Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04430 ATGCTTTCAAACTCCTCTCATATCCATGCAAACCACCAAGAACAGAAGCTCCGGAACAAGCCACTCTCCGGCGAACTCAACCACCGTAAACCGCCCCTCCCTCTCCGGGAAATGTCTTCGGTGGGGTACGACCCGGCACCGTCCGCGCCGCCGTACAACACCCCACCCGCGCTGATCGCCTTCACGCTGGGCGTGCTGGTGGTGTGCTTCGTGGCGTTCAGCATCGTCTACCTCTGCAAATACTGTTTCGCCAGCGTCATCCAGACATGGACCTTCCAACGCACCGCTTCGGGTTCCCTCATCCGTCTCACGCCGCACCGGTCTCCTCCGAGGGGCCTTGACCCGTCGTTGCTGCAGGTCTTCCCCACCTTCTCCTACTCCTCCGTGAAGGACCACCGCAAGGATCAGAACTACGGGTTGGAATGCGCCATCTGTTTGGTGGAGTTTGAAGACGACAACATGCTTCGCCTCTTGACGCTCTGCTGCCACGTCTTCCACCGGGACTGCATCGACCTCTGGCTCTGTTCTCACAAAACCTGCCCTGTTTGCCGCAGAGACCTCGACTCCGCCCCCGACCAAACTCTCAAACCCGGCAACGTCGTCGTTTCGTCCACCAGCGGCGAGTTACGCATTGATGTGAGAGAAGAAGGTCTTGATTCTTGTGATGGCAACCAAATACAAGAACAACACCAACAACTTGAACCACATGAAAAACAACATGAAAAACGTGTGCAGGAACACGAGGTGGTTGAGGAACACGTGCGGTCGCATTCGACGGGGCACTCCATAGTTATGATCAGAGAGGAGGGGGCTGAGGAGGGAAAGGATGATGAGAAGTACACGTTGAGATTGCCGGAGCATGTTTTGAGAGTGAGGCATGATAACAAGCATAACTGTACGAGGAGCTGTGCGAGTTTTAAGGACATTACCAAGCTTGATGCTCCTCCTGCACCTTGCAGTAATTGTGGGTTTGTTCAACCCCAATCACCCACTTTCTTCTCTTCCCCAACTCATACTCAGAAATCTTGA 1029 0.5452 MLSNSSHIHANHQEQKLRNKPLSGELNHRKPPLPLREMSSVGYDPAPSAPPYNTPPALIAFTLGVLVVCFVAFSIVYLCKYCFASVIQTWTFQRTASGSLIRLTPHRSPPRGLDPSLLQVFPTFSYSSVKDHRKDQNYGLECAICLVEFEDDNMLRLLTLCCHVFHRDCIDLWLCSHKTCPVCRRDLDSAPDQTLKPGNVVVSSTSGELRIDVREEGLDSCDGNQIQEQHQQLEPHEKQHEKRVQEHEVVEEHVRSHSTGHSIVMIREEGAEEGKDDEKYTLRLPEHVLRVRHDNKHNCTRSCASFKDITKLDAPPAPCSNCGFVQPQSPTFFSSPTHTQKS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04430 342 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Phac3g04430 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 190 IPR013083 -
Phac3g04430 342 MobiDBLite consensus disorder prediction 11 25 - -
Phac3g04430 342 SMART ring_2 142 183 IPR001841 -
Phac3g04430 342 FunFam E3 ubiquitin-protein ligase ATL6 102 190 - -
Phac3g04430 342 PANTHER RING FINGER DOMAIN-CONTAINING 51 187 - -
Phac3g04430 342 SUPERFAMILY RING/U-box 129 190 - -
Phac3g04430 342 Pfam Ring finger domain 141 184 IPR001841 -
Phac3g04430 342 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04430 Phac-Chr3 42532212 42533454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04430 35 314 C3H Transcription Factor Family AT2G35420 33.216 2.58e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04430 - - vum:124822565 463.381