Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04426 ATGTCAGATGGAGAGAAGAAGGAAAAGGGGAGAGAGAAGGAAGGAAAGGTTCCTCTTCTGAAGCTGTTCTCCTTTGCTGACTGGTACGACTGCGTTTTGATGGGTGTTGGATCTGTTGGGGCGTGTGTTCATGGTGCCTCTGTGCCTGTTTTCTTTGTCTTCTTCGGAAAGATTATCAATGTCATAGGCTTGGCTTACCTTTCTCCCAAAGAAGCTTCCCACGAAGTTGCTAAGTATGCATTGGATTTTGTGTATCTAAGCATAGTAATATTGTTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGAATGGCATACTTAAGGTCAATGTTGAATCAAGATATAAGACTTTTTGATACTGAAGCTTCAACTGGAGAGGTTATTTCTTCTATTACCACTAACATCATCGTTGTTCAAGATGCACTTTCTGAGAAGGTTGGGAACTTCATGCACTACATAAGCCGTTTCATAGGTGGTTTTATCATTGGTTTTGTGAGAGTGTGGCAGATAAGTTTAGTGACACTTGCCATTGTGCCCTTAATTGCTATTGCTGGTGGCCTTTACGCTTATGTCACCATTGGCCTTATCGGAAAAGTTCGAAAAGCCTATGTCAGAGCTGGTGAAATTGCAGAGGAGGTGATAGGCAATGTGAGAACGGTACAAGCATTTGCAGGAGAAGAAAGAGCAGTGAGATCATACAAAGCAGCGCTGATGAAGACATATAGAAATGGTCGAAAAGCAGGTTTAGCTAAGGGTCTGGGATTAGGCTCCATGCATTGTGTTCTTTTCCTTTCATGGGCTCTCCTTGTTTGGTACAATAGCATAGTTGTTCACAAGAATATCGCCAATGGTGGCGATGCTTTCACTACAATGCTCAATGTGGTCATTTCTGGCCTGTCACTTGGTCAGGCAGCACCTGATATTTCTGCATTTATCAGGGCAAAGGCTTCAGCTTATCCCATTTTTGAGATGATAGGGAGGGACACCATGAGCAAAGTCAGCTCAGAAAATGGTCAAAAGTTAAGCAAATTGGAAGGTCACATCCAATTTAAGGATGTCTGTTTTAGTTATCCATCTCGTCCTGATGTGGTTATCTTCAACAACTTTTGTCTTGAGATTCCTCCAGGGAAAATTGTAGCTCTTGTGGGAGGAAGTGGCTCTGGAAAAAGCACAGTTATATCATTGATTGAGCGCTTCTATGAACCACTTTCTGGTCAAATACTCTTAGATGGGAACACCATCAGGGAACTTGATCTCAAATGGCTAAGACAACAAATTGGGCTGGTTAATCAAGAGCCTGCACTTTTTGCTACAAGCATCAGGGAGAACATACTGTACGGAAAAGATGATGCCACTCTTGAAGAAATAAATCAAGCTGTGATGCTCTCTGATGCTCAGTCTTTCATTAACAATCTTCCAGATGGTTTAGATACTCAGAATCCATCAATCCTTTTATTAGATGAAGCAACCAGTGCTCTGGATGCAGAGTCTGAGAAAAGTGTACAGGAGGCTCTTGATCGTGTCATGGTTGGTAGAACAACCGTGATAGTTGCACACAGACTTTCTACCATTAGGAATGCAGATATGATCGTTGTTATTGAGGGAGGGAAGGTGGTGGAAATTGGCAATCACGAGGAACTCATTTCCAACCCAAATAATGTATATGCATCTCTTGTTCAAATCCAAGAAACAGCCTTTTCTCAAGGCCATCTTTCTGTTGATCCTTACTTGGGAGGGTCATCAAGGCGCCTCGGAGAGTCATCATCTTGCACAACAAGCTTTCGTGGAAGTTTTCGCTCAGACAAAGAATCTACTAGTCGGGCTTTTGGTGATGGAGTAGAAAGTGTTGGATGTTCAAGGCATGTATCAGTAAAAAAACTATATTCCATGATTGGTCCTGATTGGCCTTATGGTGTTTTTGGAACCTTGGGTGCATTTATTGCTGGAGCACAAATGCCACTCTTTGCTCTTGGAATCTCTCATGCTCTTGTATCTTATTACATGGATTGGGACACAACACGTCATGAAGTGAAAAAAATTGCTTTCCTCTTCTGTGGGGCAGCAGTTTTAACCATCACTGCCCATGCCATTGAACATCTTTCCTTTGGAATCATGGGAGAACGACTTACCCTTCGAGCAAGAGAAAAAATGTTTTCCGCTATTTTAAAGAGTGAAATTAGTTGGTTTGATGACATAAACAACACAAGTTCTATGCTTTCATCACGCTTAGAGACCGATGCAACATTTTTAAGAACTATAATTGTTGATCGTTCAACGATTCTTCTGCAAAATGTTGGTCTGGTTGTTACTTCATTTATTGTAGCCTTCATGTTGAACTGGAGGATAACGCTTGTTGTACTGGCCACGTACCCTTTGATCATTAGCGGTCACATAAGCGAGAAACTATTCATGCAAGGCTTTGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGTTGGCTGGGGAGGCTGTGAGTAATATCCGCACTGTGGCTGCATTTTGTGCTGAACAAAAGGTCCTTGATCTTTATGCTGATGAGCTTGTGGAGCCTTCAAAGCGTTCATTCAATCGAGGTCAAATTTCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGGTCTGTGTTGATGGAAAAAGAGATTTCTAGCTTCAAATCAATTATGAAGTCGTTTATGGTTTTGATTGTAACAGCACTAGCTATGGGGGAGACTTTGGCTCTGGCACCTGACCTTTTGAAAGGAAATCAAATGGTTGCATCCATTTTTGAAGTGATGGATAGAAAAACAGGAATATTGGGTGATATTGGAGAAGAGTTGAAGACAGTGGAAGGAACAATTGAGTTAAAAGGAATCCGTTTCAACTATCCTTCAAGGCCAGACGTGGTTATTTTCAATAATTTCAATCTTAAAGTGCCTGCAGGAAAGAATATTGCCTTGGTGGGGCACAGTGGATGTGGTAAAAGTTCAGTCATCTCCCTTATACTCAGATTTTATGATCCAACATTTGGGAAGGTGATGATTGATGGAAAAGACATCAAGAAACTCAACTTGAAATCCCTCAGGAAACATATTGGTTTAGTGCAACAAGAACCGGCTCTTTTTGCAACATCGATATATGAAAACATTCTTTATGGAAAGGAAGGAGCTTCAGAAGCTGAAGTGATTGAAGCAGCTAAACTTGCCAATGCTCATAGCTTTATCAGTGGACTTCCTGAGGGCTACTCCACCAAAGTAGGTGAGAGAGGAGTTCAACTATCTGGTGGCCAGAAACAAAGGGTAGCTATTGCAAGGGCTGTTTTGAAGAACCCTGAAATTTTGCTGCTAGATGAAGCCACAAGTGCACTGGATTTGGAGTCAGAGCGTGTGGTGCAACAAGCTCTGGACCAATTGATGCAGAACAGAACAACAGTTATAGTGGCACATAGGCTATCCACAATAAAAAATGCAGACCAAATAGCAGTTTTAGAGGATGGAAAGATAATTCAGAGAGGGATTCATGCAAGACTTGTAGAAATCACAGATGGAGCATACTACAAATTAGTCAGCCTTCAACAACAAGAACAACATGTAGAACAGCATTTTGATTAA 3654 0.416 MSDGEKKEKGREKEGKVPLLKLFSFADWYDCVLMGVGSVGACVHGASVPVFFVFFGKIINVIGLAYLSPKEASHEVAKYALDFVYLSIVILFSSWTEVACWMHTGERQAAKMRMAYLRSMLNQDIRLFDTEASTGEVISSITTNIIVVQDALSEKVGNFMHYISRFIGGFIIGFVRVWQISLVTLAIVPLIAIAGGLYAYVTIGLIGKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALMKTYRNGRKAGLAKGLGLGSMHCVLFLSWALLVWYNSIVVHKNIANGGDAFTTMLNVVISGLSLGQAAPDISAFIRAKASAYPIFEMIGRDTMSKVSSENGQKLSKLEGHIQFKDVCFSYPSRPDVVIFNNFCLEIPPGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDGNTIRELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEEINQAVMLSDAQSFINNLPDGLDTQNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADMIVVIEGGKVVEIGNHEELISNPNNVYASLVQIQETAFSQGHLSVDPYLGGSSRRLGESSSCTTSFRGSFRSDKESTSRAFGDGVESVGCSRHVSVKKLYSMIGPDWPYGVFGTLGAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKIAFLFCGAAVLTITAHAIEHLSFGIMGERLTLRAREKMFSAILKSEISWFDDINNTSSMLSSRLETDATFLRTIIVDRSTILLQNVGLVVTSFIVAFMLNWRITLVVLATYPLIISGHISEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEQKVLDLYADELVEPSKRSFNRGQISGIFYGISQFFIFSSYGLALWYGSVLMEKEISSFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASIFEVMDRKTGILGDIGEELKTVEGTIELKGIRFNYPSRPDVVIFNNFNLKVPAGKNIALVGHSGCGKSSVISLILRFYDPTFGKVMIDGKDIKKLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVIEAAKLANAHSFISGLPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDLESERVVQQALDQLMQNRTTVIVAHRLSTIKNADQIAVLEDGKIIQRGIHARLVEITDGAYYKLVSLQQQEQHVEQHFD* 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04426 1217 Gene3D ABC transporter type 1, transmembrane domain 21 347 IPR036640 GO:0005524|GO:0016020
Phac3g04426 1217 CDD ABC_6TM_Pgp_ABCB1_D2_like 638 953 - -
Phac3g04426 1217 Pfam ABC transporter transmembrane region 39 307 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g04426 1217 Pfam ABC transporter transmembrane region 650 921 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g04426 1217 Pfam ABC transporter 377 485 IPR003439 GO:0005524
Phac3g04426 1217 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 968 1204 IPR003439 GO:0005524
Phac3g04426 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 572 IPR027417 -
Phac3g04426 1217 Gene3D - 489 593 IPR027417 -
Phac3g04426 1217 Gene3D - 348 488 IPR027417 -
Phac3g04426 1217 SUPERFAMILY ABC transporter transmembrane region 22 328 IPR036640 GO:0005524|GO:0016020
Phac3g04426 1217 FunFam ABC transporter B family member 4 958 1212 - -
Phac3g04426 1217 FunFam ABC transporter B family member 2 769 965 - -
Phac3g04426 1217 Gene3D ABC transporter type 1, transmembrane domain 594 944 IPR036640 GO:0005524|GO:0016020
Phac3g04426 1217 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 358 570 IPR003439 GO:0005524
Phac3g04426 1217 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 649 935 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g04426 1217 Gene3D - 958 1217 IPR027417 -
Phac3g04426 1217 PANTHER ABC TRANSPORTER B FAMILY 625 1206 IPR039421 -
Phac3g04426 1217 SUPERFAMILY ABC transporter transmembrane region 635 949 IPR036640 GO:0005524|GO:0016020
Phac3g04426 1217 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 36 323 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac3g04426 1217 ProSitePatterns ABC transporters family signature. 1107 1121 IPR017871 GO:0005524|GO:0016887
Phac3g04426 1217 FunFam ABC transporter B family member 1 21 357 - -
Phac3g04426 1217 SMART AAA_5 385 555 IPR003593 GO:0016887
Phac3g04426 1217 SMART AAA_5 995 1193 IPR003593 GO:0016887
Phac3g04426 1217 Pfam ABC transporter 987 1135 IPR003439 GO:0005524
Phac3g04426 1217 CDD ABC_6TM_Pgp_ABCB1_D1_like 34 331 - -
Phac3g04426 1217 CDD ABC_MTABC3_MDL1_MDL2 968 1203 - -
Phac3g04426 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 962 1206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04426 Phac-Chr3 42495808 42504561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04426 36 599 Calmodulin-binding Proteins AT2G36910 34.899 2.28e-93 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04426 K05658 - gmx:100809752 2116.66