Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04410 ATGGCTCGCTCTGTGTCTTTCGTCTCAACCATCTTCGTCTTTCTTCTGCTTCTGCTCGCCACTGAGATGGGACCAACAATGGTGGCGGAGGCAAGAACTTGTGAGTCTCAGAGCCACCGTTTCAAGGGACCATGTGTGAGTGACACCAACTGCGCTTCTGTCTGCCGAACTGAACGTTTCAGCGGAGGACACTGCCGTGGCTTCCGTCGCAGATGCTTCTGCACCAAACACTGTTAA 237 0.5359 MARSVSFVSTIFVFLLLLLATEMGPTMVAEARTCESQSHRFKGPCVSDTNCASVCRTERFSGGHCRGFRRRCFCTKHC* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04410 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Phac3g04410 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Phac3g04410 78 CDD Knot1 43 75 IPR003614 GO:0006952
Phac3g04410 78 Gene3D - 32 78 IPR036574 -
Phac3g04410 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Phac3g04410 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Phac3g04410 78 PANTHER DEFENSIN-LIKE PROTEIN 1 4 78 - -
Phac3g04410 78 SMART gth_4 33 78 IPR003614 GO:0006952
Phac3g04410 78 Pfam Gamma-thionin family 32 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04410 Phac-Chr3 42317460 42318043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04410 1 78 Plant Defensins Gene Families AT2G02130 62.821 1.48e-31 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04410 - - gmx:547843 145.206