Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04407 ATGAAACTCACTGGTATCACCATTACACACACACAAAGACATGTTGAGGATGACCTTATGAGGTATGTAGCGGAGGAAAATATTGTCTTGTCATTTCCTTGCTGCTGCAGTGTAGTGGATAATGTGATCAGTACTCTGCAGTGGAATATGTCTCAAGTAGACCCAAAATATGTGCGTCCATCATATCCATCTATTCCTCCTCTAGATTTTTCTCTGGATGTGTCAACAATGAGGAATGTTGCTTGCTATATGAGCCACAATTCAACTCCAAATGTTTTGGTTCAGTTTGTTCTGTATGATCACAAAAATTTGATGTTCCCACATCTTATGCTATTTGCAATGGAGAATATCCCTCCCATGAGAGAGCTCAGCCTTGATTATGGTGTAGCTGATGAGTGGACAGGGAAGCTCTCTACATGTAACTGA 426 0.4061 MKLTGITITHTQRHVEDDLMRYVAEENIVLSFPCCCSVVDNVISTLQWNMSQVDPKYVRPSYPSIPPLDFSLDVSTMRNVACYMSHNSTPNVLVQFVLYDHKNLMFPHLMLFAMENIPPMRELSLDYGVADEWTGKLSTCN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04407 141 PANTHER G9A, ISOFORM B 70 137 IPR043550 GO:0002039|GO:0016279|GO:0042054
Phac3g04407 141 Gene3D SET domain 13 141 IPR046341 -
Phac3g04407 141 Pfam SET domain 71 128 IPR001214 GO:0005515
Phac3g04407 141 ProSiteProfiles SET domain profile. 1 128 IPR001214 GO:0005515
Phac3g04407 141 SUPERFAMILY SET domain 55 140 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04407 Phac-Chr3 42287930 42288556 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04407 67 130 Su(var)3-9 homologs AT5G04940 42.188 1.36e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac3g04407 SET 2.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04407 - K11420 gmx:100785015 179.104