Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04395 ATGTACGAAGAAAGTAGTTGCTTTGATCCCAATGGGATGGTGGCAGAAGACTGTTTCTCCCAGATGGTTTCAAAATCAGAGGCAGTTATGTCTGTGAGTAGCATACAGCCCCAAAACACCTTTGGGATGGAAAACTTAGCCTACACATATTCCAGTGGAGAAGATGCTTCAGCTGTTGCTATGGAAATCATTGCACACCCCCAACATAACTCATACAATCAAGTCAATAACTTGAACCCCCAGTTTGTGCAAGTGGTGAACAACCATGCTTCATGTGAGGACCTTTATTCTTTCCCCCCTCACTCCTCCACGCTTGAGAGGGGTCACCATGATCACCAATATCCTTACTCCACACCAACACCAGATCTCCTCAACCTTCTCCACTTGCCTATCACCTTTGAAAACCAAAGCAGCAATCTTCCAAAACCCTCTGGCCCTATGGGAACAGCGGACAGCACAAACGTCTCCTCTGTTTCCTATGACCCTTTCTTGCATCTCAACCTGCGAGCACCTCCCCCATCTCTGAGAAATGATTTTGCCTTTGGAGGAGGAGGAGGGGGTGCCATAGAAGGCAGTGGAATTGCCTACCAAGATTTTGGAAATGGGGTGGTGGAGTTAACTCAAGATGTTGGGAAAAAGAGAGGGGGGAAAAGGACCAAGCAGTTTACCAGTACTACTACTGAGAGACAAAGGAGAGTGGATTTGAGTAGTAAATTTGATGCTTTGAAAGAACTCATCCCAAACCCCTCCAAGAGTGATAGAGCATCCGTGGTGGGAGATGCTATTAACTATATCAGAGAGCTTAAGAGGACAGTGGACGAACTAAAACTATTGGTGGAGAAGAAAAGGCACGAGAAACAAAGGGTAGTAGTGATGATGAGGCACAAGGTTGAAACTGAAGGGCAAGAGGACTCGAATCTCGACCCAGATGATGGTTCCTACAATGAAAGCTTAAGAAGTTCTTGGATACAAAGGAAATCCAAAGACACCGAGGTTGATGTGCGCATTGTTGACAACGAGGTAACAATCAAGCTTGTTCAAAGGAAGAAGATGGATTGCTTGGTGCATGTCTCACAGGTTCTTGATCAACTCAACCTCGATCTCCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGCTATCTGTTCAATACCAAGATGTGTGACGGTTCTTGTGTTTATGCAAGTGCTATAGCCAACAAGCTCATTCAGGTCATGGACACAAGTTTGGTAGCAGAGTCACTCAATTGA 1254 0.4561 MYEESSCFDPNGMVAEDCFSQMVSKSEAVMSVSSIQPQNTFGMENLAYTYSSGEDASAVAMEIIAHPQHNSYNQVNNLNPQFVQVVNNHASCEDLYSFPPHSSTLERGHHDHQYPYSTPTPDLLNLLHLPITFENQSSNLPKPSGPMGTADSTNVSSVSYDPFLHLNLRAPPPSLRNDFAFGGGGGGAIEGSGIAYQDFGNGVVELTQDVGKKRGGKRTKQFTSTTTERQRRVDLSSKFDALKELIPNPSKSDRASVVGDAINYIRELKRTVDELKLLVEKKRHEKQRVVVMMRHKVETEGQEDSNLDPDDGSYNESLRSSWIQRKSKDTEVDVRIVDNEVTIKLVQRKKMDCLVHVSQVLDQLNLDLQHVAGGHIGDFCSYLFNTKMCDGSCVYASAIANKLIQVMDTSLVAESLN* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04395 417 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 219 268 IPR011598 GO:0046983
Phac3g04395 417 MobiDBLite consensus disorder prediction 210 231 - -
Phac3g04395 417 PANTHER TRANSCRIPTION FACTOR BHLH91 1 412 IPR045895 GO:0006355|GO:0048658
Phac3g04395 417 SMART finulus 225 274 IPR011598 GO:0046983
Phac3g04395 417 Gene3D - 211 298 IPR036638 GO:0046983
Phac3g04395 417 Coils Coil 265 285 - -
Phac3g04395 417 CDD bHLH_AtMYC1_like 226 284 IPR045896 -
Phac3g04395 417 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 217 288 IPR036638 GO:0046983
Phac3g04395 417 Pfam Helix-loop-helix DNA-binding domain 227 268 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04395 Phac-Chr3 42216435 42218401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04395 1 413 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 39.427 9.00e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g04395 HLH 4.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04395 - - vra:106767981 774.622