Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04392 ATGCAGAAGAGGAGTGTGTTTTTTCCAGATTTGGGTGATGAAATGCAGATTGAAATTCATCAACTTCGGATTACTCAGGATTGGAATGAAACCACACGCCAGTGGGAACGAAGAGGAAACTGGAAGTTTCTTGAATTGGTTGAGGAGCTTCAAAATGGATCATTTGTTGCTGTTTCAGCTAGACAAATATGGTATGATGTATTGCAGAAAATGAAAATCGGCATGAGGGGAGAGTGGGCCTACAATGACAAGAACTTGTACAGAGAGGCTGTGAGGGGTATCATTAATACCTACTCAGGTCTCACAGTGAACCAGGTTTTCTCAGGCTTGGACCTTCCAGGGAGTGTGGTTGATGGAAGACCTGAGCAGGAATTTCAACCAATGAATATTGACTTAAACATGACCTTGTTTGATAAAGATAATTTTGTGGAGAAAGAACCTTCTCCTCTTGTTAACCAGGTTTTACCTGAGTTTGAAATGCAAATTTCCCACGAAGATGCTCCTGAAGTAGTTTCAGGTGACAGTTATGAAAGAAGTGAATCATCTGCAAGTCAAAAGTGGAGAAGCTCAAGAGATTCAAAGGCCAAAATATGTAAGAGTCAAAGCAATTTGGAACAAGGATCACTTTTACCTAACTTCAAACCTCTAAATATTTTGTCATGGTTGATAGACAACAAGATGGTATTTCCAAGGTCTACTGTGTATTATTACAATGAACAAGCATGGTACCATGCAGCTTCTAGTTGGACTAGAGGAAAAATAACTCGCAATGGAATCAAGTGTTACTGTTGTGACATAATATACAGTTTCGTTGGGTTTGAATATCATGCTAGTGGCATCAGTACCAGCACACCCTCTGCTTGTATTTTCTTGAAAGATGGTAAATCACTCTTGGAATGCCAAATAGAAATAATGCAAAATCTGGTGACAAGAGAAACTAGTGAAAAGCCTTGCAGTAATTTGCTTCTGGATGATAATGACTTAATTTGTTCTCTTTGCCTCTATGGTGGTGAACTTATTTTGTGTGATCAATGTCCATCTTCATTTCACATAACATGTCTTGGATTGGAGCATATCCCTGATGGTCATTGGCTTTGCCCACAATGTCGTTGCCGTAGCTGCCGCCAAAGCAAACTAGATGAAAATGAGGAAGCACATGCTGCCCTTACTTGTGCTCAGTGTGAACATAAATACCATGTTTGGTGCCTGGAGAATGGAGGCTTAGATTTATCAAGATGTTCAGAAAACTGGTTCTGTGGAAAAAGCTGTGAAAAGATACACGAGGGCCTTTTTCAGCTATTAGGAAAGCCAGTTTCAGTGGGCGTGGACAATCTAACATGGACATTGGTGAAGTATATTGAGCCTGAGTGTGATGATCTTGGTAGAATTAGAAATGACAGTTCAATGGCAGAAAGTTACACAAAACTCAATCTTGCTCTTTCGGTGATGCACGAATGTTTTGAGACCCTCAAGCACACTTTATCTAGCAGAGATATCATTGAAGATGTTATATTCGGCAGAAGGTCAGAGCTGAAGCGATTAAATTTCCAGGGTTTCTATACTGTACTACTTGAGAAAAATGAAGAACTGGTTTCTGTGGCAACTGTTAGGGTCCACGGGGAGAAGGTAGCAGAAGTACCTTTCGTTGGTACCAGATTACACTATCGTCGACATGGATTTTGTCGCATGCTAATGAATGGCCTTGAACAGTTTCTGATGCAATTAGGTGTGGGGAGGCTTGTTTTGCCGGCTGTTCCTAGTACGCTCAAGACATGGACTGATTCATTTGGTTTTGCAAAGATGACTGATTTTGAGAGGTCTGAATTTCTGGACTATACCTTCTTAAATTTTGAGGGTAGCATCATGTGCCATAAGCTGCTGATGAGGATTCCACCTCCATATTCAGAATCACAACCCAGATGTGATTATTTACCTCAAAGTAGTGTTGACCTCACTAATTCCATTTCAGTATCACAAGGAGGGATGTTGTATCAGCAAACCGGAAAGTAA 2010 0.4055 MQKRSVFFPDLGDEMQIEIHQLRITQDWNETTRQWERRGNWKFLELVEELQNGSFVAVSARQIWYDVLQKMKIGMRGEWAYNDKNLYREAVRGIINTYSGLTVNQVFSGLDLPGSVVDGRPEQEFQPMNIDLNMTLFDKDNFVEKEPSPLVNQVLPEFEMQISHEDAPEVVSGDSYERSESSASQKWRSSRDSKAKICKSQSNLEQGSLLPNFKPLNILSWLIDNKMVFPRSTVYYYNEQAWYHAASSWTRGKITRNGIKCYCCDIIYSFVGFEYHASGISTSTPSACIFLKDGKSLLECQIEIMQNLVTRETSEKPCSNLLLDDNDLICSLCLYGGELILCDQCPSSFHITCLGLEHIPDGHWLCPQCRCRSCRQSKLDENEEAHAALTCAQCEHKYHVWCLENGGLDLSRCSENWFCGKSCEKIHEGLFQLLGKPVSVGVDNLTWTLVKYIEPECDDLGRIRNDSSMAESYTKLNLALSVMHECFETLKHTLSSRDIIEDVIFGRRSELKRLNFQGFYTVLLEKNEELVSVATVRVHGEKVAEVPFVGTRLHYRRHGFCRMLMNGLEQFLMQLGVGRLVLPAVPSTLKTWTDSFGFAKMTDFERSEFLDYTFLNFEGSIMCHKLLMRIPPPYSESQPRCDYLPQSSVDLTNSISVSQGGMLYQQTGK* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04392 669 SMART PHD_3 371 423 IPR001965 -
Phac3g04392 669 SMART PHD_3 329 370 IPR001965 -
Phac3g04392 669 PANTHER PHD FINGER PROTEIN 12 85 634 IPR042163 GO:0003714|GO:0045892
Phac3g04392 669 Pfam PHD-finger 329 371 IPR019787 -
Phac3g04392 669 Gene3D - 480 615 - -
Phac3g04392 669 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 389 IPR013083 -
Phac3g04392 669 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 461 633 IPR000182 GO:0016747
Phac3g04392 669 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 514 609 IPR016181 -
Phac3g04392 669 ProSiteProfiles Zinc finger PHD-type profile. 327 372 IPR019787 -
Phac3g04392 669 Pfam Tify domain binding domain 252 303 IPR032308 -
Phac3g04392 669 Pfam Acetyltransferase (GNAT) family 505 593 IPR000182 GO:0016747
Phac3g04392 669 CDD NAT_SF 522 582 - -
Phac3g04392 669 SUPERFAMILY FYVE/PHD zinc finger 310 370 IPR011011 -
Phac3g04392 669 MobiDBLite consensus disorder prediction 167 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04392 Phac-Chr3 42158451 42165368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04392 215 575 PHD Transcription Factor Family AT5G58610 48.509 2.84e-103 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac3g04392 Acetyltransf_1 8.5e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04392 - - var:108323857 1050.81