Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04380 ATGGAGTTTGAGAAAAACGAAAGTGTGAAGATTCGCGAGATTTGCGGGAACGGAAGTTGCATGAAAGTGACAGAACTTGAGGCCAAACTTGATGCAGGAAATGTTGAAGAAGCAGAAGCAACCTTGCGTAATGGGTTGTCAATAAGTTCCGAGGAAGCAAAGGCTCTTCTTGGAAAAATAGAGTATCAAAGAGGTAATGTGGAGAATGCCTTTCGAGTGTTTGATGGAATTGATCTTCAACCAATCATACAACAATTACAAACTTCCCTTTCGGACAAAACACCTGCGAAGAATACTTTAACGTTTGAAGCCATCTACCTAAAAGCCAAGTGTTTACAAAAGTTGAACAAATGTACAGAAGCTATTGATGGGTGTAAGAGTGTTCTGGATGTTGTTGAGAAGGTATATAGTCAGGGTAAAGTTGATACACAAGGCGACAATAAATTGCAGGAGATAGTGAGTCATGTAGTTGAGCTTCTTCCAGAGCTTTGGAAAGAGACTGGGTGCTATGATGAGGCATTGTCAGCTTATAGGAATGCCCTACTTGGTCAATGGAACCTTGATAATGAATTTTGTGCAAGAATTCAGAAGGCACTTGCTGTGTTTTTGTTGTACAGTGAAGTGGAGGCAAGTCCACCTAACAAGACCGATGGGTGCTATGTACCCAAAAGCAATATGGAAGAAGCAGTTCTTCTTTTACTGATTATTTTGAGAAACTTCGTCCTTGGTAAGATAAAGTGGGATCCTTCAGTTATGGAACATCTGGTTTTCACACTTTCAACATGTGGACAAACCTCTATTCTAGCAAAGCAATTTGAAGAGTTGACACCTGGTACATATCAACGCATTGATCGTTGGATTTTTTTAGCTCTGTGTAACAGTGGAGCTGGAGAAAATAATAGTGCTTTGAATCTGCTTAGGATGTCTTTGCATAAACATGAACGACCAGATGACCTGATAGCATTATTATTGGCTGCCAGAATTTGTAGTGAGGATCCTCATCTTGGTGCTGAGGGAGCAGGTTATGCACAAAGAGCAGTGAATAATGCCCAGGGATTAGATGGGCATTTGAAAGGTGTGGGTCTTAGGATGTTGGGACTTTGCCAAGGAATACAAGCTACGGTTTCTTCTTCTGACCATGAGAGGTCTGACCTTCAATCTGAAGCTCTAAAATCATTGGAGAAGGCAATTCGATTGGAGCAGAACAATGCTGATCTCATTTTTGAATTGGCTATTCAATATGCTATGCACAGAAATTTGAGTGTTGCTTTATCATGTGCTAAACAGTTCTTTGACAAAACTGGTGGCTCTACACTAAAAGGGTGGAGATTGCTCGCTCTAGTTCTGTCTGCACAGAAAAGATTTACAGAGGCTGAAGTGGTCATTGATGCAGCTTTAGACGAGACTGCAAAATGGGAGCAGGGGCCACTACTCAGGCTAAAAGCCAAGTTGAAGATCTCTCAATTACGACCCATGGATGCTATTGAAATTTATCGGTACGTTCTTGCATTGGTTCAAGCCCAGAAGAAATCACCCGGGCCTCCTAAACAAGGTTCACAGGTGGATGATGCTAAGATAAACGAACTTGAAGTTTGGCATGGTTTGGCAAATTTATATGCAAACCTTTCTCACTGGAAGGATGCCGAAATCTGTTTGCAGAAAGCCAGAGAGTTAAAGGAATACTCACCAGCAACAACACACACGGAAGCTATTATGTTCGAAGGACGTGGAGAAAATTTAGAAGCTCTCACTGCTACTTTGAATGCAGTTTTGTTTGAACCAAACTATGTGCCAAGCAAGATCTTGATGGCTTCTTTGATACTGAAAATTGGTTTTAATGCTGCTGCGTCTGTTGCTAGATGTCTACTTTGTGATGCACTTAGAATAGAACCTACCAATCGCATGGCTTGGTATTACTTGGGATTAACTCACAAGGCTGATGGTCGAATAACTGATGCTGCTGATTGCTTCCAAGCAGCTTCCTTGCTTGAAGAATCAGATCCTATTGAAACTTTTAGCTCTATGATTTGA 2031 0.4126 MEFEKNESVKIREICGNGSCMKVTELEAKLDAGNVEEAEATLRNGLSISSEEAKALLGKIEYQRGNVENAFRVFDGIDLQPIIQQLQTSLSDKTPAKNTLTFEAIYLKAKCLQKLNKCTEAIDGCKSVLDVVEKVYSQGKVDTQGDNKLQEIVSHVVELLPELWKETGCYDEALSAYRNALLGQWNLDNEFCARIQKALAVFLLYSEVEASPPNKTDGCYVPKSNMEEAVLLLLIILRNFVLGKIKWDPSVMEHLVFTLSTCGQTSILAKQFEELTPGTYQRIDRWIFLALCNSGAGENNSALNLLRMSLHKHERPDDLIALLLAARICSEDPHLGAEGAGYAQRAVNNAQGLDGHLKGVGLRMLGLCQGIQATVSSSDHERSDLQSEALKSLEKAIRLEQNNADLIFELAIQYAMHRNLSVALSCAKQFFDKTGGSTLKGWRLLALVLSAQKRFTEAEVVIDAALDETAKWEQGPLLRLKAKLKISQLRPMDAIEIYRYVLALVQAQKKSPGPPKQGSQVDDAKINELEVWHGLANLYANLSHWKDAEICLQKARELKEYSPATTHTEAIMFEGRGENLEALTATLNAVLFEPNYVPSKILMASLILKIGFNAAASVARCLLCDALRIEPTNRMAWYYLGLTHKADGRITDAADCFQAASLLEESDPIETFSSMI* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04380 676 PANTHER PROTEIN NPG1 4 673 IPR043376 -
Phac3g04380 676 Gene3D Tetratricopeptide repeat domain 510 671 IPR011990 GO:0005515
Phac3g04380 676 Gene3D Tetratricopeptide repeat domain 218 509 IPR011990 GO:0005515
Phac3g04380 676 Gene3D Tetratricopeptide repeat domain 25 201 IPR011990 GO:0005515
Phac3g04380 676 SUPERFAMILY TPR-like 35 312 IPR011990 GO:0005515
Phac3g04380 676 SMART tpr_5 634 667 IPR019734 GO:0005515
Phac3g04380 676 SMART tpr_5 529 562 IPR019734 GO:0005515
Phac3g04380 676 SMART tpr_5 283 316 IPR019734 GO:0005515
Phac3g04380 676 SMART tpr_5 102 135 IPR019734 GO:0005515
Phac3g04380 676 SMART tpr_5 439 472 IPR019734 GO:0005515
Phac3g04380 676 SUPERFAMILY TPR-like 387 591 IPR011990 GO:0005515
Phac3g04380 676 SUPERFAMILY TPR-like 524 660 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04380 Phac-Chr3 42074709 42078595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04380 4 676 Calmodulin-binding Proteins AT2G43040 63.545 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04380 K21843 - gmx:100811897 1044.26