Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04375 ATGGAGAAATCAAGGAGTTCAGACCAAGTTGTTGTCTTCATCGACCAACATAACCCTAAACCATCATCCATGGAAGCAGAAAATCATCAAGAGAAACTCAGGCAACCCTTAAAAGTCAGAACTCTGAACCGTCTGAACTTCTCAAAACCCAAATCCCGAATCCAAGAGTACAACTATGTTCCCCGCAACAAACTAGCAACCTCTGAAGAAGGTGACATTATCCAACCCTCCTATAAGCTCACTTCCAATGAAGAAGACGAGGAGGAAGAAGATGACTGGAAATGGGACAAGGAAGAGACGGAAGAAGATGGGTCAGAGCATAACACAAAGTTGCACCAAAAGAGGAAGTTCAAAATCAAGTGGAGGCTGGTGATGGAGTGGCTTTTGTTTCTCAATATCTTGGCATGCTTGGTGTGTTCTTTGACCATATCTTCCATAACCAACATGCACGTCCTGGGATTGGAGATTTGGAGGTGGTGTGTCATGATGATGGTTATATTCAGCGGTCGTCTGGTTTCAGGGTGGCTAGTTGGTGTGATAGTGTTCTTCCTCGAACGAAACTTCATGCTGAGGGATAAGGTGTTGTACTTCATATACGGGCTCAGAAAGAGCATAAGAAACTGTTTGTGGTTAGGTCTGGTGTTACTCTCCTATTGGAGCTTGGTATTCGACGATGTCCAGAAGAAGAACCACAAGTTTCTGAACAAGATGTTTCAGGCGTTGGTGGCGGTTTTGGTGGGCGCAACCATTTGGCTGGTGAAGATCGTGCTGGTGAAGATGCTGGCATCGTCGTTCCACGTGACCACATACTTTGACAGAATGAAGGAGAGCGTTTTCCACCACTACATTTTGGATGCATTGTCGAGTCCACCGTTCGAAGACGCGGAGGAGATAGTGCGGCAGCACCAGCTGACGGGGTCGAAGTCGATGCCGGCGAGGATGAAGATGAAGGAGGCGAAGAAGTTGAATAGGTTTGGGTCGAGGAAGATCGACATGGAGAAGCTGAGAGAGCTGAGCATGGAGAGCACTGCGTCTGCTTGGAGTGTGAAGAGACTTGTCAACTATGTCAGATCTTCTGGCTTGTCCACCATTTCAAGGACTGTGGATGATTTTGGCAACGCTGAGTCTGAGATCAGTAGTGAGTGGGAAGCTAGAAACTGTGCTCAGAGGATCTTCAAGAATGTTGCCAAACCTGGTGCCAAGTATATTGAAGAAGAAGATCTGATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTTCCACTCTTTGAAGGTGCTCTAGAGACAGGACAGATCACCAGATCTTCATTCAGAAATTGGGTGATTCGAGCATATTATGAACGAAAAGCCCTAGCACAATCACTGAATGATACGAAAACAGCAGTGCAACAGCTTCACAAAATAGCAAGTGCAATTGTTAGTGTGATAATAATCATTGTGATGCTGTTGGTGATGGAGGTGGCCACACTCAAGATAATATTATTCTGCATCACACAAACAGTTCTCATAGGTGTTGCCTTCCAAGGTACCTGCAAGACTGTGTTGGAAGCCATCATCTTTGTCTTTGTCATGCACCCTTTTGATATTGGAGACCGATGCGTCATTGATGGAGTTCATATGATCGTGGAAGAGATGAATATCTTGACAACAGTGTTTCTTCGATATGACAATGAGAAAATATACTACCCTAACCAAGTTTTGCTCTCTAAGCCCATAAGCAACTTCTACAGGAGTCCAGAGATGGGGGATGCAGTTGATTTCACTGTCGATGTTTCAACTTCCATGGAGACCATCCTTGCCCTCAAGAAGTCAATTCAAATGTACATTGAGAGCAAACCCAATTATTGGAATCCAAAACACAGTGTGATAGCAAAAGGAATTGAGAACATGGACAAGCTAAAATTTGCCTTGTGTGTGCAACACACTATCAACCATCAGAACTACAGTGAGAGAAATGTTAGGATGACTGAACTCTTGTTTGAACTGAAGAGGATCTTTGAGATCCATGGTGTCAAGTACCATCTTCTTCCTCAGGAGATCCAAATCACCCATATGAACATTGAACCTGCAAAACTTCTGTTTCAATCATGA 2094 0.4413 MEKSRSSDQVVVFIDQHNPKPSSMEAENHQEKLRQPLKVRTLNRLNFSKPKSRIQEYNYVPRNKLATSEEGDIIQPSYKLTSNEEDEEEEDDWKWDKEETEEDGSEHNTKLHQKRKFKIKWRLVMEWLLFLNILACLVCSLTISSITNMHVLGLEIWRWCVMMMVIFSGRLVSGWLVGVIVFFLERNFMLRDKVLYFIYGLRKSIRNCLWLGLVLLSYWSLVFDDVQKKNHKFLNKMFQALVAVLVGATIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYILDALSSPPFEDAEEIVRQHQLTGSKSMPARMKMKEAKKLNRFGSRKIDMEKLRELSMESTASAWSVKRLVNYVRSSGLSTISRTVDDFGNAESEISSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGQITRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKIASAIVSVIIIIVMLLVMEVATLKIILFCITQTVLIGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVHMIVEEMNILTTVFLRYDNEKIYYPNQVLLSKPISNFYRSPEMGDAVDFTVDVSTSMETILALKKSIQMYIESKPNYWNPKHSVIAKGIENMDKLKFALCVQHTINHQNYSERNVRMTELLFELKRIFEIHGVKYHLLPQEIQITHMNIEPAKLLFQS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04375 697 Coils Coil 83 103 - -
Phac3g04375 697 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 31 687 IPR016688 -
Phac3g04375 697 MobiDBLite consensus disorder prediction 83 99 - -
Phac3g04375 697 Pfam Mechanosensitive ion channel 468 672 IPR006685 GO:0016020|GO:0055085
Phac3g04375 697 Gene3D - 527 576 IPR023408 -
Phac3g04375 697 SUPERFAMILY Sm-like ribonucleoproteins 518 576 IPR010920 -
Phac3g04375 697 PIRSF Memb_At2g17000 3 693 IPR016688 -
Phac3g04375 697 MobiDBLite consensus disorder prediction 76 107 - -
Phac3g04375 697 FunFam Predicted mechanosensitive ion channel 527 576 - -
Phac3g04375 697 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04375 Phac-Chr3 42033261 42039027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04375 98 687 Mechanosensitive Ion Channel Family AT5G12080 47.412 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04375 K22048 - gmx:100813521 1197.57