Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04337 ATGGGTTCCAATGGTAGCAAAGCCACTTCTTCTTCTTCTTCTTCGTCGGGGAGTTTAAGGAAGGGTCGATCTAAGGGCATTAGAGTTTTTCAATCTTATTGTCTTGGAACTACTTCTGGTTCTCACGACAGAGATAGTGAAGACCAGGTTTGTGATCAGAATAAAGTGAATGGCTGTGATGTTACATATGCTAATGGCAATGTAACAAATTCATATGAGGTGAAGACAGAGTCATTTAGAAAGGTTAAAGCTAGTGAAATGACTTGTATGCCTTCTAACACTGACCTTCAAGAATGGGGAGAAACAAGCATCCCTAACACTTCATCAAGAACTGCTAGCAGCACTATTCATAATTCTTCAACTCATTCCTTAAACCATACAAGTAATTTCCTTTCTCAGCTTAGCCTCATTCCTGGTAGTGTAAGCTTCAGACTTAGCAGAACAACCAGTTTAGGGTCATCAAGGCCTTATCCTGTTTCTTCTGCAAGTCTTTCAATATATGACAACGAAGATGAGTGTAATCTCCATCCTAGATCTCCTGTAAATTCGATTGACAGAAGAGAAACACAACAATACAATAACCTGCTTCGGACATCTTTTTTCAATCAAATACACGCCCAATCTCATGAAGATGCTTCTAATAATTTAAGGTCAAATGTCCCAACATCAGGTACACTAGCAAACTTGCAGAGAAATCCCACAGATGGAGTTCCCACAAGAGAAGGGCTGGATGTGAACTTATTTTCTCCAAGAATTCAAACAGAGACAGAAATTGTTGACACTAGACGTATTGATAGACGAAATAGCGCTCGAGAATCAGTCGAACAGAATGTTCCTTTTAGAGGAACTTTAAGTGTTGGAAGGCTTCATGATAGAGTTCTTGGTGGATCAACATTTCCTGACCTCACCTTTTGCCCTCTGCAACAGGAAAGAGAGCTGAGAAATGGTAGCCTCCATAGCCAGGATATTGAGAGGCAATTGGTGGAGGGAGATTCAAGAGTGTTACCATCTGATCATACTACTATTAATTCTTCTACTTCTACCATGTCTAACTCCATGCTTGGTATCCAAGACAATGAGGTTGAGACTTCACGATTGAGAGAAGGTAGGTATCAGGATCTACTGGAGCATAGGTCCAATTTCCTTGAACGGAGAAGAAGAATGCGGTCCCAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACATGATAGATCATGTATCTTGTCTGGTCAACATAGAGATGGTCATTGTACATGCCGAATCAACAATCCTAACACTAATTCAAATGATGACACTGGTGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTTGTTTTATCTTCCCGCCCTTCTGTATCTTCTACTGGATCTGTTCCTGCACCTAATGATGTTGTTGATTCCTTGCCTGTCAAGTTATACCAGAAGTTGCACAAGCATCAAGAGGATGGTGCTCAATGCTATATATGCCTTGTGGAGTATGAGGACGGAGACAACATGCGAGTACTGCCATGCCATCACGAATTTCATAGAACATGTATAGACAAGTGGCTGAAGGAGATTCACAGATTATGA 1638 0.4115 MGSNGSKATSSSSSSSGSLRKGRSKGIRVFQSYCLGTTSGSHDRDSEDQVCDQNKVNGCDVTYANGNVTNSYEVKTESFRKVKASEMTCMPSNTDLQEWGETSIPNTSSRTASSTIHNSSTHSLNHTSNFLSQLSLIPGSVSFRLSRTTSLGSSRPYPVSSASLSIYDNEDECNLHPRSPVNSIDRRETQQYNNLLRTSFFNQIHAQSHEDASNNLRSNVPTSGTLANLQRNPTDGVPTREGLDVNLFSPRIQTETEIVDTRRIDRRNSARESVEQNVPFRGTLSVGRLHDRVLGGSTFPDLTFCPLQQERELRNGSLHSQDIERQLVEGDSRVLPSDHTTINSSTSTMSNSMLGIQDNEVETSRLREGRYQDLLEHRSNFLERRRRMRSQVRALQRLGSRFENLSGHDRSCILSGQHRDGHCTCRINNPNTNSNDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSTGSVPAPNDVVDSLPVKLYQKLHKHQEDGAQCYICLVEYEDGDNMRVLPCHHEFHRTCIDKWLKEIHRL* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04337 545 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g04337 545 Pfam Ring finger domain 507 541 IPR001841 -
Phac3g04337 545 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 544 - -
Phac3g04337 545 MobiDBLite consensus disorder prediction 93 123 - -
Phac3g04337 545 SUPERFAMILY RING/U-box 486 541 - -
Phac3g04337 545 MobiDBLite consensus disorder prediction 208 242 - -
Phac3g04337 545 FunFam Putative RING zinc finger domain superfamily protein 477 545 - -
Phac3g04337 545 MobiDBLite consensus disorder prediction 208 235 - -
Phac3g04337 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 470 544 IPR013083 -
Phac3g04337 545 ProSiteProfiles Zinc finger RING-type profile. 508 538 IPR001841 -
Phac3g04337 545 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04337 Phac-Chr3 41790767 41795450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04337 240 543 C3H Transcription Factor Family AT5G45290 57.962 2.77e-101 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04337 - - gmx:100812272 803.127