Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04336 ATGGGTTCCAATGGTAGCAAAGCCACTTCTTCTTCTTCTTCTTCGTCGGGGAGTTTAAGGAAGGGTCGATCTAAGGGCATTAGAGTTTTTCAATCTTATTGTCTTGGAACTACTTCTGGTTCTCACGACAGAGATAGTGAAGACCAGGTTTGTGATCAGAATAAAGTGAATGGCTGTGATGTTACATATGCTAATGGCAATGTAACAAATTCATATGAGGTGAAGACAGAGTCATTTAGAAAGGTTAAAGCTAGTGAAATGACTTGTATGCCTTCTAACACTGACCTTCAAGAATGGGGAGAAACAAGCATCCCTAACACTTCATCAAGAACTGCTAGCAGCACTATTCATAATTCTTCAACTCATTCCTTAAACCATACAAGTAATTTCCTTTCTCAGCTTAGCCTCATTCCTGGTAGTGTAAGCTTCAGACTTAGCAGAACAACCAGTTTAGGGTCATCAAGGCCTTATCCTGTTTCTTCTGCAAGTCTTTCAATATATGACAACGAAGATGAGTGTAATCTCCATCCTAGATCTCCTGTAAATTCGATTGACAGAAGAGAAACACAACAATACAATAACCTGCTTCGGACATCTTTTTTCAATCAAATACACGCCCAATCTCATGAAGATGCTTCTAATAATTTAAGGTCAAATGTCCCAACATCAGGTACACTAGCAAACTTGCAGAGAAATCCCACAGATGGAGTTCCCACAAGAGAAGGGCTGGATGTGAACTTATTTTCTCCAAGAATTCAAACAGAGACAGAAATTGTTGACACTAGACGTATTGATAGACGAAATAGCGCTCGAGAATCAGTCGAACAGAATGTTCCTTTTAGAGGAACTTTAAGTGTTGGAAGGCTTCATGATAGAGTTCTTGGTGGATCAACATTTCCTGACCTCACCTTTTGCCCTCTGCAACAGGAAAGAGAGCTGAGAAATGGTAGCCTCCATAGCCAGGATATTGAGAGGCAATTGGTGGAGGGAGATTCAAGAGTGTTACCATCTGATCATACTACTATTAATTCTTCTACTTCTACCATGTCTAACTCCATGCTTGGTATCCAAGACAATGAGGTTGAGACTTCACGATTGAGAGAAGGTAGGTATCAGGATCTACTGGAGCATAGGTCCAATTTCCTTGAACGGAGAAGAAGAATGCGGTCCCAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACATGATAGATCATGTATCTTGTCTGGTCAACATAGAGATGGTCATTGTACATGCCGAATCAACAATCCTAACACTAATTCAAATGATGACACTGGTGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTTGTTTTATCTTCCCGCCCTTCTGTATCTTCTACTGGATCTGTTCCTGCACCTAATGATGTTGTTGATTCCTTGCCTGTCAAGTTATACCAGAAGTTGCACAAGCATCAAGAGGATGGTGCTCAATGCTATATATGCCTTGTGGAGTATGAGGACGGAGACAACATGCGAGTACTGCCATGCCATCACGAATTTCATAGAACATGTATAGACAAGTGGCTGAAGGAGATTCACAGGGTATGTCCACTTTGTAGAGGGGACATATGCATATCTGATTCAACACCAACAGAGAACTGGAGTGGGTAG 1701 0.4145 MGSNGSKATSSSSSSSGSLRKGRSKGIRVFQSYCLGTTSGSHDRDSEDQVCDQNKVNGCDVTYANGNVTNSYEVKTESFRKVKASEMTCMPSNTDLQEWGETSIPNTSSRTASSTIHNSSTHSLNHTSNFLSQLSLIPGSVSFRLSRTTSLGSSRPYPVSSASLSIYDNEDECNLHPRSPVNSIDRRETQQYNNLLRTSFFNQIHAQSHEDASNNLRSNVPTSGTLANLQRNPTDGVPTREGLDVNLFSPRIQTETEIVDTRRIDRRNSARESVEQNVPFRGTLSVGRLHDRVLGGSTFPDLTFCPLQQERELRNGSLHSQDIERQLVEGDSRVLPSDHTTINSSTSTMSNSMLGIQDNEVETSRLREGRYQDLLEHRSNFLERRRRMRSQVRALQRLGSRFENLSGHDRSCILSGQHRDGHCTCRINNPNTNSNDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSTGSVPAPNDVVDSLPVKLYQKLHKHQEDGAQCYICLVEYEDGDNMRVLPCHHEFHRTCIDKWLKEIHRVCPLCRGDICISDSTPTENWSG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04336 566 ProSiteProfiles Zinc finger RING-type profile. 508 550 IPR001841 -
Phac3g04336 566 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g04336 566 SUPERFAMILY RING/U-box 486 557 - -
Phac3g04336 566 FunFam Putative RING zinc finger domain superfamily protein 477 555 - -
Phac3g04336 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 470 554 IPR013083 -
Phac3g04336 566 SMART ring_2 508 549 IPR001841 -
Phac3g04336 566 MobiDBLite consensus disorder prediction 93 123 - -
Phac3g04336 566 Pfam Ring finger domain 507 550 IPR001841 -
Phac3g04336 566 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 562 - -
Phac3g04336 566 MobiDBLite consensus disorder prediction 208 242 - -
Phac3g04336 566 MobiDBLite consensus disorder prediction 208 235 - -
Phac3g04336 566 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04336 Phac-Chr3 41790767 41795450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04336 240 557 C3H Transcription Factor Family AT5G45290 58.967 1.15e-109 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04336 - - gmx:100812272 842.032