Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04327 ATGGAGCATGATGAATCTGTGCTGAGTGGCACAGTGGGAAGCATACTAATCGCCATGGGTTCAGCAAGTTTCGGCATCACAATATTCCATCTCATTATCCTTTGTCGGACTCATAACCGTCTTCCTGTCACCAACCAAAATCCACCACCACAACAACCACCACGCACCGTTAACATTCCGGTGCTGCCACGCCCCATTCCGATCCACACATACCACAAGAAGAAGAAAACCGATGATGAGGTGGCGGCGGAGGGCGAAGACGACGAAGATTGCACGTGCGCCGTGTGCTTGGGGGAGTTCGAAGAAGGTGAAGAGTTGAGGACGTTGCCGGAGTGCATGCACTCTTTCCACGTCGCCTGCATTGACACGTGGCTCTCTTCCCGCTCCAGTTGCCCCGTTTGCCGTGCTCATGCCACGCCCTCGCCGGCGGTGGACCACCCTTCGCCGGAGCTTGCTTCCGCTGCGTCCACTGCGCATCACATGATAGATATCAGGCAAATTTCACGCTTTCAAAATGGCTAA 522 0.546 MEHDESVLSGTVGSILIAMGSASFGITIFHLIILCRTHNRLPVTNQNPPPQQPPRTVNIPVLPRPIPIHTYHKKKKTDDEVAAEGEDDEDCTCAVCLGEFEEGEELRTLPECMHSFHVACIDTWLSSRSSCPVCRAHATPSPAVDHPSPELASAASTAHHMIDIRQISRFQNG* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04327 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 142 IPR013083 -
Phac3g04327 173 SUPERFAMILY RING/U-box 92 141 - -
Phac3g04327 173 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
Phac3g04327 173 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 9 140 IPR044675 -
Phac3g04327 173 Pfam Ring finger domain 92 135 IPR001841 -
Phac3g04327 173 SMART ring_2 93 134 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04327 Phac-Chr3 41726872 41727466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04327 15 140 C3H Transcription Factor Family AT2G17450 38.889 2.31e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04327 - - vra:106765957 251.136