Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04313 ATGTCCCAAGATAGAGATTCTGCAATAAAGCTTTTTGGAGCAGATATTCAAAATACCCATATTCCCATTAAGCCAACCACTCCATTCACAGATTTACACTCATTGACTCAGATTCAGCCTCTGCCTCAACCCATCATCATCATGAATGGACTTGAAGAATCAACTAATTATGAAGTGGATGTTCCTTTGAATGAAGAAGTTTCTAGCAAACTGACTGACCCTGAAGAAGATGGCAATGATACTCCAAGAAACATATGTAAAAATCCTGTTCTGAAACTGGTGACCAAAGTAGTTCATAGGACTAATGATAATGAGCACAGGAATGCTAAAAGAAATATTGATCAAGAAAAAGTTTTCAAGAAGCCAGACAAGGTCCTGCAATGTCCTCGCTGCAATAGTTTGGAAACAAAGTTTTGCTACTTCAACAATTACAATGTCAACCAACCTAGACATTTCTGTAAAAATTGCCAAAGGTATTGGACTGCTGGAGGGGCAATTAGGAATGTTCCTGTTGGGGCTGGTAAGCGTAAGAACAAGCACTCAGCTCTGCTGTATTGTCAGAAACCTGTGACTCCTGATGGTGCATCTGCCATCCAGACACATTCCAGTGCTTCTAGTGATGATATGATTCTCTCATCCAATGAACTCTCTGTGACTTCAAGACAAGAAAGGGAGGAAAATCCTCTTAGTGAATCCTTAGAAACTGTGTTGAGTCTCAATGGCCAAAGAAAATTTGATGTGGACTTTTCCACTATCAAAGATGATGGTGAGGACCCTTCCAGCAACTCTATTAGATCTGATGAAATAGAGCAGGTTGGTTTGGCACAACACTCTAATGGTTTAATTCCCTTACATCCATTTCATTATCATCCTGTCCCTTCATGGTCTTATCAATGGAATCCATGCTGGAATGTGAAGGAATTTAGGTCCAGTAGCACTAGTTCTAGTCCTCCTTACACAGGTTCTCCAACCATGATGGCAGTTTCTGGCTTCTCCATACCAACAGTAGTGCTACCTGCAGAACCTTATTCGTATTCAGGTTTCATGTCAAGCTTAGCTGGTCAAAAGGAAGAGTCTTCATTGATTGGATCTGCATTTAGTGGCATCTCATTGTCTTCATCTTCTGTTAGCATCAGTACTAGTTCTGGTGATAGATCCCCAACCTTGGGAAAGCATTCTAGAGATGGAAGCACACCGAAGGAAGCTGCAATGAAACAGAATCTTTGGGTGCCTAAGACTGTCAGAATTAACGGCCCAGAAGAGGCTGCAAACAGTTCTATATGGACAACTTTGGGAAGAAAATCTGATCAGAGCAAAATCATTATAAAAGGAAGAGTCTTCAAATCATTTGAATCTAAGACAAGTCCTGATCATAATCAAATTCGAAGGACAAACCCTGCTGCTTTCTCACGCTCTGAATCTTTTCAGGAAAGCTTGTGA 1440 0.4069 MSQDRDSAIKLFGADIQNTHIPIKPTTPFTDLHSLTQIQPLPQPIIIMNGLEESTNYEVDVPLNEEVSSKLTDPEEDGNDTPRNICKNPVLKLVTKVVHRTNDNEHRNAKRNIDQEKVFKKPDKVLQCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGAIRNVPVGAGKRKNKHSALLYCQKPVTPDGASAIQTHSSASSDDMILSSNELSVTSRQEREENPLSESLETVLSLNGQRKFDVDFSTIKDDGEDPSSNSIRSDEIEQVGLAQHSNGLIPLHPFHYHPVPSWSYQWNPCWNVKEFRSSSTSSSPPYTGSPTMMAVSGFSIPTVVLPAEPYSYSGFMSSLAGQKEESSLIGSAFSGISLSSSSVSISTSSGDRSPTLGKHSRDGSTPKEAAMKQNLWVPKTVRINGPEEAANSSIWTTLGRKSDQSKIIIKGRVFKSFESKTSPDHNQIRRTNPAAFSRSESFQESL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04313 479 MobiDBLite consensus disorder prediction 459 479 - -
Phac3g04313 479 ProSiteProfiles Zinc finger Dof-type profile. 126 180 IPR003851 GO:0003677|GO:0006355
Phac3g04313 479 ProSitePatterns Zinc finger Dof-type signature. 128 164 IPR003851 GO:0003677|GO:0006355
Phac3g04313 479 PANTHER CYCLIC DOF FACTOR 2 1 478 IPR045174 GO:0003700|GO:0006355
Phac3g04313 479 MobiDBLite consensus disorder prediction 377 404 - -
Phac3g04313 479 Pfam Dof domain, zinc finger 123 180 IPR003851 GO:0003677|GO:0006355
Phac3g04313 479 MobiDBLite consensus disorder prediction 451 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04313 Phac-Chr3 41686634 41689723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04313 92 478 C2C2-Dof Transcription Factor Family AT5G39660 35.096 1.79e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac3g04313 zf-Dof 3.5e-32 No_clan