Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04309 ATGGATGGGGTCGCACGTGCGGACAAGGCTCCGTCCACGGACTTGGCCTCGGAGTGGCGTCCCCGCGGCTCTGCGTTCGCGCCTTGTGTGCCTAAGCCTCAAGAAGAAGCTTCTGCTGCTGCTGTTGGGAAGCCGCAACCGTTTCGCGTGGTTGTGAGAAAGCCCTTGGTGGCTAGATTGACCAAGGAAATAGTTCAAACATACCAAATATGCAATTCACAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCGTCAGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATCTTGACAGTGAATTTAGTCTTGAACCATTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAAGTCTGGGATTCAGATACCAACAGTTTTGTTGCCGTGAAAATCATTAAAAACCAACCTGCATACTATCAACAAGCATTGGTTGAAGTAACTATCTTAACAACGTTAAATAAGAAGTATGATCCTGAAGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATATCAACGGCATTTGTGCATTTGCTTTGAATTGTTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCCCTTGGTATTGTTCAGCTATTCTCTAAGCAGATTTTATGCGGACTTGCTCTGCTAAAAGAGGCTGGAATTATTCATTGTGATCTGAAGCCAGAAAACATACTTTTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCTTATATTCAGAGTCGATACTATAGATCACCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCAGAATTTGATCTTTTGAAACGGATGATTGAAATTCTTGGAGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACTCAAGTAAATTCTTTAAGTGCATTGGGAGTCTCCAGAACATAGAGAGCAGTGAGAGTTCCAAAAATGGAAGAAGTGTTTATCAAGCATTGACAGTGGAAGAATACGAAACTAGAGAATTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAATCATATGAATCTAGAGGCAATTGTTGCCAACTATCCTTACAGAAAAAACCTACCTAAAGAAGATGTTGTCAAAGGGCTTGTTGAATTGGATCCTTTAAAGCGCTGGTCACCTGTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACATCCTTATAAGCCTCCCCCTGAGACTCCTCAAATGCCCGTAGTTCAAAATATCAAGGTGGATAATCATCCAGGAGGAGGACACTGGTTTGCTGCCGGTCTATCACCTAATGTTCAGGGCAAAAGCCGAGCTTCACTCTATAGCAGTCCACATTTTCAGATGGTTCAACATCAGCCTGCTAATAGTTATGGGAGTGTAGGAAGCCATGGGAGCTATAATGACAGTATTGGGCTTGGAAGCAGCTATGGAAGTTTTGGAGAAAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCTGGTATGAACATGCACAATCAGGGCAGTATGTCAATGCTTGGGAATAGTCCTGATGCTAGGAGAAGAGTTAAATACCAACCTGGGAATGGGTTGGGCATAAGTCCATCAGCTGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTTCCTATAGTCAGGTTTCAGTTGTTTCTCCAGGACACTTTGGACCAACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACAGCTGCAATTAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCTGGAAGTCCTCAAACTCAAGAAACAACATTTTCTTCAAATTGGCAAAGTCAATATCCTGACAGCACAAGCCATACTGAGGGAACATCACAACCTCTTGGCAGTTCGCCATCATATCTACAGTCAAATTGTATTCCTGGAAACCGAAAACCACGAGGAAGTGGAGGATTTTCTGCTAATCCGAACATTTCATGTTTTAAGCCCGGTGCTAATTTGAACTCACAATCAACAGAATTGGGTCATGACAATGCAGAGACAGGCATTTCATTGCCCGATCCTGGCGACTGGGACCCTAATTACAGTGATGAATTACTTCTTCAAGAGGATGGTTCAGATGAAAGCTGTTTGGCAAATGAGTTTGGCAGAAGTATGAATCTTGGATCTACTGAAACATGGGCCGGATTTGGAAGGTTCAACCATGAGTCCAGCTCAAACACTCCAATAATCATGCAAAGACAAAATGGACCAAGTCAATCATTTACTAATGTCGAGATGGGTAGCCTTCCAACGCATGATCTTCAAGCAGCATATGTACCCTCTCTGTCTAAGCAGTTTCATCTCATGCCTCATATTTTGCATAATTCTCCAAGTCGTTTTGGACACCAATCTGTTCAGAGATATACACATGGTAGACCCCCCCAGGCTGCTGATTGGAATCAAATTAAAATTCAGGCTCCTTCTGGTTTCAGCAGTGTGGGTCCTCGTTCTCCTAGGGGTAACTCATTCACCAACAGTATGACATGGGGGCGCAGAATGGATCCTCCGGTATCAAGCATGCCTCCGACATCCCGCACAAGAAAAGATTATGCAAGGATAGACTAG 2805 0.4232 MDGVARADKAPSTDLASEWRPRGSAFAPCVPKPQEEASAAAVGKPQPFRVVVRKPLVARLTKEIVQTYQICNSQFKYSEDLNPKRFLTSPSVGVLNDGYDNVNSDLILTVNLVLNHLEKNKRYIVKDLLGHGTFGQVAKVWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNSSKFFKCIGSLQNIESSESSKNGRSVYQALTVEEYETRELKKPSIGKEYFNHMNLEAIVANYPYRKNLPKEDVVKGLVELDPLKRWSPVQASKHPFVTGEPFTHPYKPPPETPQMPVVQNIKVDNHPGGGHWFAAGLSPNVQGKSRASLYSSPHFQMVQHQPANSYGSVGSHGSYNDSIGLGSSYGSFGESSNMFAYYSPIGPSGMNMHNQGSMSMLGNSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSSYSQVSVVSPGHFGPTSPARGTSHGSPLGKTAAISQFNRRKNWGHSGSPQTQETTFSSNWQSQYPDSTSHTEGTSQPLGSSPSYLQSNCIPGNRKPRGSGGFSANPNISCFKPGANLNSQSTELGHDNAETGISLPDPGDWDPNYSDELLLQEDGSDESCLANEFGRSMNLGSTETWAGFGRFNHESSSNTPIIMQRQNGPSQSFTNVEMGSLPTHDLQAAYVPSLSKQFHLMPHILHNSPSRFGHQSVQRYTHGRPPQAADWNQIKIQAPSGFSSVGPRSPRGNSFTNSMTWGRRMDPPVSSMPPTSRTRKDYARID* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04309 934 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Phac3g04309 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Phac3g04309 934 Gene3D Phosphorylase Kinase; domain 1 88 203 - -
Phac3g04309 934 MobiDBLite consensus disorder prediction 635 709 - -
Phac3g04309 934 PANTHER DUAL SPECIFICITY PROTEIN KINASE 57 456 - -
Phac3g04309 934 MobiDBLite consensus disorder prediction 605 721 - -
Phac3g04309 934 Gene3D Transferase(Phosphotransferase) domain 1 204 454 - -
Phac3g04309 934 MobiDBLite consensus disorder prediction 888 912 - -
Phac3g04309 934 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 86 202 - -
Phac3g04309 934 MobiDBLite consensus disorder prediction 888 934 - -
Phac3g04309 934 SUPERFAMILY Protein kinase-like (PK-like) 118 476 IPR011009 -
Phac3g04309 934 Pfam Protein kinase domain 124 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04309 934 SMART serkin_6 123 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04309 934 MobiDBLite consensus disorder prediction 610 627 - -
Phac3g04309 934 CDD PKc_YAK1 123 453 - -
Phac3g04309 934 ProSiteProfiles Protein kinase domain profile. 123 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04309 934 MobiDBLite consensus disorder prediction 567 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04309 Phac-Chr3 41622885 41645167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04309 122 352 MAP Kinase Gene Family AT3G18040 33.740 2.91e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Phac3g04309 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04309 K18670 - gmx:100792777 1716.44