Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04302 ATGGCCACGCTTCTCAGAAAACTCTGCGAATCCGCGTCGCTGAAGCGGTCGGGTACCGCTCCGAACCCGAACCCGAACCCGTCATCGGAACGCGCGCCGTCTCCTCTGGGCGCCTTCGACCCTCTCCCCGCCGATATACTCATGCAAATCGTGCGACTCTTGGGCCCCAAACACGCCGCCAGACTCAGCCTCGTCAGCAAGTCGTGGCGATCCCTTGTCTCCGACAACGACCTCTGGGTGCACTTCCTCCGCACTCACCACCCTCACTCCGCGCTCTTCGCCGAAACCGCTCTTAGCTCCGGCTACCCGCTTCCGACCTTGGCTGCTCAGAGCTCGCCACGTGGCTCGCTCCAGCATGTTTTCGCCCTCCGCGAACGCCTCCCTCCGTCCGTTGTCATCGACGGGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGACTCTCATCCTTCCGGGCGATTCGCGACCTTTCTGGAATTTGGTAACGTTGAAACACCCATGTATACTAGACTTCGACATTTTTTCGGGACTATCTATAACAGGATGCAGGTGAAACCAAGTTCTCAACCAGCTGTTGTTTCTATACCAATTTGTCACTATGATGATACTGAATCAGCCAAAGCATCAAGACAGCAGCTTAAAGAAGCAATCTATGCTGCCTTGTTTGACATGAATGTTCCTGCTGTTTGTGCTCTCAATCAGGGGACTTTAGCTCTGTATGCTGCAAAACAAACTTCTGGGATTGCTGTTAATATAGGCTTTCAAGTGACATCTATTGTTCCAATTTTAAATGGTAAAGTGATGCGAAAGGTGGGTGTGGAAGTTGTGGGGCTGGGAGCACTAAAGCTTACTGGATTTCTTAGAAAACAAATGCAAGAGAACAACATAAGTTTTGAATCTCTATACACTGTTCGCACTCTGAAAGAGTTGCATGGCAACAGAAGCTATGTTATGTTGCTGCTGACTATGAAGCTGAGCTATTGA 984 0.5071 MATLLRKLCESASLKRSGTAPNPNPNPSSERAPSPLGAFDPLPADILMQIVRLLGPKHAARLSLVSKSWRSLVSDNDLWVHFLRTHHPHSALFAETALSSGYPLPTLAAQSSPRGSLQHVFALRERLPPSVVIDGGSGYCKFGWSKDSHPSGRFATFLEFGNVETPMYTRLRHFFGTIYNRMQVKPSSQPAVVSIPICHYDDTESAKASRQQLKEAIYAALFDMNVPAVCALNQGTLALYAAKQTSGIAVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLRKQMQENNISFESLYTVRTLKELHGNRSYVMLLLTMKLSY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04302 327 SMART fbox_2 42 82 IPR001810 GO:0005515
Phac3g04302 327 SUPERFAMILY Actin-like ATPase domain 245 310 IPR043129 -
Phac3g04302 327 Gene3D - 127 244 - -
Phac3g04302 327 Pfam Actin 179 303 IPR004000 -
Phac3g04302 327 Pfam F-box-like 42 81 IPR001810 GO:0005515
Phac3g04302 327 SUPERFAMILY Actin-like ATPase domain 129 250 IPR043129 -
Phac3g04302 327 Gene3D Actin; Chain A, domain 4 280 318 - -
Phac3g04302 327 Gene3D - 247 279 - -
Phac3g04302 327 CDD F-box_AtARP8-like 38 82 - -
Phac3g04302 327 Gene3D - 35 126 - -
Phac3g04302 327 ProSiteProfiles F-box domain profile. 36 82 IPR001810 GO:0005515
Phac3g04302 327 CDD NBD_sugar-kinase_HSP70_actin 131 275 - -
Phac3g04302 327 PANTHER ACTIN 171 310 IPR004000 -
Phac3g04302 327 SUPERFAMILY F-box domain 25 99 IPR036047 GO:0005515
Phac3g04302 327 MobiDBLite consensus disorder prediction 13 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04302 Phac-Chr3 41560226 41567979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04302 177 326 Cytoskeleton Gene Families AT5G59370 25.828 5.10e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04302 K16616 - gmx:100804254 551.592