Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04299 ATGCAGGTTGAGGTGAGCAAGTACACTGAAGGAGTGAATGAAAAGGCATTACGACCAAATGGGTTACCGAAGTCATTAATTCGATATGATGCTCGTCAAAAGGAGACAGCTTTGGGTTCCATCACCGAGGTTGTCCAAACTGTTAAGGACCCAAAATCTATTATCAATAAGAGGAGTGATGATACTGCCTCCAAGCAAGAAGAGGAAGAGAAAATGAATCTTGATTTTGTTTTGCCAAAGTCTGCTGATGCTGGGAATACAAGCACACCTGGTAGACAACCTTCTCCACTCAACATCCAAAGCATGAGTTCTAATCAGGAAAAGAGCAGGACATCAAGATCAGGACGGATTTCTTTCAAGAGTCTTAAAGGGAAATCACAGAGTTCTGCTGGGAGAGATGAGGAGAAGTCCATTGTTGAACCTGAGGTTTTGATGACCAAAGAAATGGAGTGGTCGAACAATTGGGAGAACTCACTAAGAGAGAGGGACATAAGGCAGGGAATTGATCTAGCAACCACATTGGAGAGGATAGAAAAGAACTTCGTGATTTCTGATCCTAGACTGCCAGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACGGAATATACAAGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCAGAAACAGACCAGGCAACTGTTTCAAGGATAAGGGATGCTATCAGAGAACAGAGGGAAATCACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAGAAGTTTTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGCGTTCAACTAGATGGAAGTGATCATTTGGAACCCTTAGAAAACCGCCTCTCTGAGACAACTGAGCTTCAGAGTGCTAAGCTGGTGAAAGCAACTGCAGAAAATGTGGATGAAGCTGTCCGAGAACTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCCAACCTGTCTTTCCACGACCTCACAAAAGGGATAATCCTTCTTGGATAGCAATACAAAAGGTTGTTGCAAGAGGCGAAAAAATTGGCCTCCAACATTTTGTGCCCATAAGGCCACTAGGTTGTGGAGATACTGGCAGTGTTCATTTGGTGGAACTCAAAGGTACTGGTGAACTATATGCAATGAAAGCAATGGAAAAGTCTGTCATGCTAAATCGTAATAAGGTTCACCGATCATGCATTGAGCGAGAGATTATATCATTATTGGATCATCCTTTTCTTCCAACACTATACACCTCATTTCAGACTTCTACACATGTATGTTTGATTTCTGACTTTTGCCACGGGGGAGAATTGTTTGCATTGCTTGACAAACAACCAATGAAGATTTTCAAAGAAGAATCAGCAAGATTCTATGCGGCAGAGGTTGTCATTGGCTTGGAATATCTCCACTGTCTAGGTATAATTTATCGTGACTTAAAGCCTGAAAATATCTTAATTCAGAAGGATGGTCACGTTGTATTAACTGATTTTGATCTATCATCTATGACATCGTGTAAACCCCAGGTTGTGAAGCAAGCATTACCTGGTAAAAGAAGATCAAGAAGTGGACCACCACCAATACTCGTTGCAGAGCCAGTTACACAATCAAACTCGTTTGTTGGAACTGAAGAATATATTGCCCCTGAAATTATAACTGGAGCTGGGCATACCAGCGCTATAGATTGGTGGACCCTTGGTATCTTATTGTATGAGATGCTCTATGGCCGTACACCATTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGGCTAGTCTTGCAGCCAGGCAGTTGATTAATGCACTGTTGCAGAGAGATCCAACAAGTCGTCTAGGTTCAACCACTGGTGCAAATGAAATCAAACAACACCCTTTTTTCCGTGGAATCACTTGGCCTCTAATCCGCAACATGACTCCACCCCCATTAGAAGTTCCTCTGAAATTGATAGGAAAAGAAGCAGTGGCGAAGGAAATAAAGTGGGAAGATGATGGAGTGCTAGTTAACTCCATTGACATGGACATCTTTTGA 2109 0.4187 MQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKETALGSITEVVQTVKDPKSIINKRSDDTASKQEEEEKMNLDFVLPKSADAGNTSTPGRQPSPLNIQSMSSNQEKSRTSRSGRISFKSLKGKSQSSAGRDEEKSIVEPEVLMTKEMEWSNNWENSLRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVSRIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHLEPLENRLSETTELQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKRDNPSWIAIQKVVARGEKIGLQHFVPIRPLGCGDTGSVHLVELKGTGELYAMKAMEKSVMLNRNKVHRSCIEREIISLLDHPFLPTLYTSFQTSTHVCLISDFCHGGELFALLDKQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILIQKDGHVVLTDFDLSSMTSCKPQVVKQALPGKRRSRSGPPPILVAEPVTQSNSFVGTEEYIAPEIITGAGHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPTSRLGSTTGANEIKQHPFFRGITWPLIRNMTPPPLEVPLKLIGKEAVAKEIKWEDDGVLVNSIDMDIF* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04299 702 SUPERFAMILY Protein kinase-like (PK-like) 345 674 IPR011009 -
Phac3g04299 702 Pfam Protein kinase domain 370 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04299 702 FunFam Putative LOV domain-containing protein 451 665 - -
Phac3g04299 702 Gene3D Phosphorylase Kinase; domain 1 366 450 - -
Phac3g04299 702 Gene3D PAS domain 155 319 - -
Phac3g04299 702 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Phac3g04299 702 ProSiteProfiles Protein kinase domain profile. 367 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04299 702 MobiDBLite consensus disorder prediction 82 126 - -
Phac3g04299 702 CDD PAS 189 281 IPR000014 -
Phac3g04299 702 SMART pac_2 243 285 IPR001610 -
Phac3g04299 702 FunFam LOV domain-containing protein 366 450 - -
Phac3g04299 702 ProSiteProfiles PAS repeat profile. 166 239 IPR000014 -
Phac3g04299 702 PANTHER FLIPPASE KINASE 1-RELATED 73 670 - -
Phac3g04299 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Phac3g04299 702 Gene3D Transferase(Phosphotransferase) domain 1 451 668 - -
Phac3g04299 702 MobiDBLite consensus disorder prediction 55 76 - -
Phac3g04299 702 ProSiteProfiles PAC domain profile. 240 294 IPR000700 -
Phac3g04299 702 CDD STKc_phototropin_like 365 676 - -
Phac3g04299 702 NCBIfam PAS domain S-box protein 192 281 IPR000014 -
Phac3g04299 702 MobiDBLite consensus disorder prediction 55 139 - -
Phac3g04299 702 SUPERFAMILY PYP-like sensor domain (PAS domain) 185 281 IPR035965 -
Phac3g04299 702 SMART serkin_6 367 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04299 702 Pfam PAS domain 189 281 IPR000014 -
Phac3g04299 702 FunFam LOV domain-containing protein 155 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04299 Phac-Chr3 41540908 41558274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04299 1 701 AGC Kinase Gene Family AT5G58140 75.319 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac3g04299 Pkinase 1.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04299 K20715 - gmx:100804783 1290.79