Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04285 ATGGGTAGTAGTGACATGGACAAAACCCCTAAAGAGAAGGAGTCTAAGACACCTCCAGCTACGTCACAGGAGCAGTCTCCACCAACAACTGGCATGGCGACTATTAATCCTGACTGGTCTAACTTTCAGACATATTCTCCCATGCCTCCACACGGTTTTTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGCGTCCAGCATATTATGCCTCCCTATGGCACCCCAGCACATCCCTATGTAGCAATGTATCCCCATGGTGGCATTTATGCCCATCCATCCATTCCTCCGGGGTCTTATCCTTTCAGTCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATACATCGGGAAATAACCCAGGCAGCATTGAAGTTGGTGCTAAACCTCCCGAGGTGAAGGAAAAATTACCAGTCAAAAGATCAAAAGGAAGTGCTAGTGGGGGCAGTTTGAATATGTGGATTACAGGAAAAAATAATGAACCTGGTAAAACAACTGGAGAATCTGCTAATGGGATTCATTCCAAAAGTGGCGATAGTGCAAGTGATGGAACTAGTGAAGGAAGTGATGAGAATTCCCAGAATGACTCTCAATTGAAATCCGGGGAGAGGCAGGACTCTTTTGAAGACGAACCATCTCAAAATGGAAGTTCAGCACATGCTCCTCAAAATGGGGTACATAGTAGACCTCAGACACTTGTTAACCAAACTATGCCTACTATACCTATATCTACTGCAAGTGCTCCTGGAGCAGTTCCTGGTCCCACTACTAATTTAAATATTGGAATGGATTACTGGGGCACGCCAACTTCATCCGCCATTCCTGCACTGCATGGAAAGGTTTCTTCTACTGCAGTTGCTGGAGGAATGATTACTGCTGGGTCAAGAGATGGTGTTCAGTCCCAAATTTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGCAGATCCAGGTTACGGAAGCAGGCTGAATGCGATGAACTAGCTCAGCGTGCTGACGTTTTGAAAGAAGAAAATGCCACTCTCCGAGCAGAAGTAAGCAGGATCAGGAGTGAGTACGAGCAGCTACGTTCTGAGAATGCTTCCCTCAAGGAGAGACTTGGGGAGATACCCGGTGTTGCTACGCCTGGGAACGAGGATGTCAGGTCTGGCCAGAATGATCAGCATGTTAGTAATGACACTCAACAAAGTCGTCAGAAAGAGGCTGTGCAGGGTGTTCATTAG 1257 0.4702 MGSSDMDKTPKEKESKTPPATSQEQSPPTTGMATINPDWSNFQTYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPAHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADTSGNNPGSIEVGAKPPEVKEKLPVKRSKGSASGGSLNMWITGKNNEPGKTTGESANGIHSKSGDSASDGTSEGSDENSQNDSQLKSGERQDSFEDEPSQNGSSAHAPQNGVHSRPQTLVNQTMPTIPISTASAPGAVPGPTTNLNIGMDYWGTPTSSAIPALHGKVSSTAVAGGMITAGSRDGVQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENATLRAEVSRIRSEYEQLRSENASLKERLGEIPGVATPGNEDVRSGQNDQHVSNDTQQSRQKEAVQGVH* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04285 418 SMART brlzneu 309 373 IPR004827 GO:0003700|GO:0006355
Phac3g04285 418 CDD bZIP_plant_GBF1 314 364 IPR045314 GO:0003700|GO:0006355
Phac3g04285 418 Gene3D - 312 365 - -
Phac3g04285 418 MobiDBLite consensus disorder prediction 311 332 - -
Phac3g04285 418 MobiDBLite consensus disorder prediction 114 231 - -
Phac3g04285 418 MobiDBLite consensus disorder prediction 390 418 - -
Phac3g04285 418 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Phac3g04285 418 MobiDBLite consensus disorder prediction 369 418 - -
Phac3g04285 418 MobiDBLite consensus disorder prediction 19 41 - -
Phac3g04285 418 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 311 374 IPR004827 GO:0003700|GO:0006355
Phac3g04285 418 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 316 331 IPR004827 GO:0003700|GO:0006355
Phac3g04285 418 MobiDBLite consensus disorder prediction 1 41 - -
Phac3g04285 418 MobiDBLite consensus disorder prediction 146 202 - -
Phac3g04285 418 MobiDBLite consensus disorder prediction 212 231 - -
Phac3g04285 418 Pfam Disordered region downstream of MFMR 136 276 - -
Phac3g04285 418 SUPERFAMILY Leucine zipper domain 312 369 IPR046347 GO:0003700|GO:0006355
Phac3g04285 418 Coils Coil 329 377 - -
Phac3g04285 418 MobiDBLite consensus disorder prediction 1 18 - -
Phac3g04285 418 Pfam bZIP transcription factor 309 371 IPR004827 GO:0003700|GO:0006355
Phac3g04285 418 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 410 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04285 Phac-Chr3 41431237 41439107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04285 1 382 bZIP Transcription Factor Family AT2G35530 63.683 6.87e-162 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac3g04285 MFMR_assoc 3e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04285 K09060 - gmx:100101912 760.755