Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04249 ATGACCACCAAACTAAACCCTCCTCTCAACTATAAGTACCCACCGCAATTATTTTACTTTCCAAAACGTGACACTCCAACCAAACACTTTTCTCTCTCTCTCCAAAATTTCCTCCGCTTCCACATGACACGCGGGCTCAGACTCCTCCAATCCCAGGCGGTGCCCCCACCGGAGGCCGCCGCCGCCGTCGAGTCCGACTTCGTGGTGATCCTGGCGGCGCTCCTCTGCGCGCTCATTTGCGTGGTGGGCCTCGTCGCCATCGCGCGCTGCGCCTGGCTCCGTCGGCCACCAGCTTCCGTCGGCGGCGGTGGATCCCCGCCTGCGCCGTCGAACAAGGGCCTGAAGAAGAGAGTGGTGAACTCGCTTCCGAAGTTCACGTACGCCGGCGAAGGTGATCGGTGCAAGTGGTCGGAGTGCCCGATCTGCCTGACGGAGTTTGCCGGCGGCGACGAGGTCCGCGTGCTGCCGCAGTGCGGGCACGGGTTCCACGTTGCGTGTGTGGACACGTGGCTCTCATCGCACTCCTCGTGTCCCTCTTGTCGCGCGCCCTTCGTCGTCGCTCGCTGCCAGAAGTGCGGCCACTTCCCAGCTGTCGCCGCCGAAACCAGCGAACCGGAGGCAAAGCCCAGTGACGGCTGCAATGGCGATGATAACAGAAATGGCGATGATAACAGAAATGTAAATGTTACTCACGGGTTTAGTAATTACAGTTTCTTGCCATGA 723 0.6017 MTTKLNPPLNYKYPPQLFYFPKRDTPTKHFSLSLQNFLRFHMTRGLRLLQSQAVPPPEAAAAVESDFVVILAALLCALICVVGLVAIARCAWLRRPPASVGGGGSPPAPSNKGLKKRVVNSLPKFTYAGEGDRCKWSECPICLTEFAGGDEVRVLPQCGHGFHVACVDTWLSSHSSCPSCRAPFVVARCQKCGHFPAVAAETSEPEAKPSDGCNGDDNRNGDDNRNVNVTHGFSNYSFLP* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04249 240 CDD RING-H2_EL5-like 138 181 - -
Phac3g04249 240 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 56 193 - -
Phac3g04249 240 Pfam Ring finger domain 138 181 IPR001841 -
Phac3g04249 240 MobiDBLite consensus disorder prediction 210 224 - -
Phac3g04249 240 MobiDBLite consensus disorder prediction 203 228 - -
Phac3g04249 240 SUPERFAMILY RING/U-box 122 187 - -
Phac3g04249 240 SMART ring_2 139 180 IPR001841 -
Phac3g04249 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 186 IPR013083 -
Phac3g04249 240 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04249 Phac-Chr3 41182593 41183765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04249 42 192 C3H Transcription Factor Family AT1G20823 59.756 5.54e-59 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04249 - - gmx:100813341 277.33