Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04243 ATGATTCGAGTTGAGCTTGTGGCGTTGATGGTTCTCTTCGAAGGGTTATTTTCAGCTGGAGCTGTATCGGATAATTCCACTATACCTGCTTTGGTAAACATTGGAGTTCTCTATTCTTTCAATACCAGTGTTGGTAAAATGGTGAAAACTGCTGTAGAAGCGGCGGTTGAAGATGTAAATTCTGATCCATCTATTCTTGCTCAAACTACGTTGAAGCTCTCAATGCAAGAAGATACCAAATACAGAGGATTTTTGAGCATTGCTGAGGCCTTGCAGCTGATGGCGACACAAACTGTGGCTATAATTGGCCCCCAGACCTCTACAACAGCTCATGTCATATCTCATATAGCAAATGAGCTCCAAGTTCCTCTGCTATCATTTACAGCCACTGACCCTACCCTTTCTTCTCTTCAATTCCCATTCTTTATTAGAACTGCTTTTAGTGACATTTATGAAATGACTGCAATAGCAGACCTTGTTAACTACTTTGAATGGAGAGAGGTTATTGCAGTTTATGGTGATGATGACCATGGGAGGAATGGAATGGGTGCATTAGGGGATAAGCTAGCCGAGAGGCGTTGCAAGATTTCATTTAAAGCACCTATGACTCCTGAGGCAACTAGAGAGGAGATTACTGATGTACTTGTTCAGGTGGCCCTGGCAGAATCCCGGGTTATAGTTCTTCACACAAGTACTGCTTGGGGGCCAAAAGTGTTAAGTGTGGCAAAGTCTCTGGGGATGATGGAAAATGGGTATGTCTGGATAACAACTACTTTTCTCTCTACATGGTTGGATATAAATAGCCCTCTATCTTCTGATGCAACGGATGACATGCAAGGGGTCATTACACTTCGTATGTATGTACCAGATTCAAAGCTCAAAAGATGGTTTGTTTCTAGGTGGACAAACTTGACTACTACTGCTGGAAATACTGGTAATGGTACCCTTGGTTTGAGTACTTATGGTATCTTTGCATATGATACTGTGTTTGCTCTTGCTCATGCACTTGATGCATTTTTCAAACGAGGGAATCAAATTACATTTTCACATGATCCAAAGCTATCTCAAATACGTGGAGACAACATGCATCTTGATGCCGTGAAAATCTTCAACGAAGGAAATCTGTTGCGTAAACATATCTATGAGGTTAACATGACTGGAGTATCAGGCCTATTCAAGTATGCATCTGATGGAAACCTTGTTAATCCAGCTTATGAAATCATCAATGTGATTGGAACAGGAACCCGGAGGGTTGGTTATTGGTCTAATTACACTGGATTATCAATTGTTTCTCCAGAAGAACTTTATTCAAAACCACCTAATCGATCCAGTGCAAGCCAAAAGCTACTCCCTGTGTTTTGGCCTGGAGAAACAACCCAAAAGCCCCGTGGTTGGGTTTTTCCAAACAGTGGAAGGATGTTAAGAATTGGAGTTCCAAAAAGGGTTAGTTACCGGGATTTTGTTTCTCACGTACAAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTGAACTTGTTGCCCTATGCTGTCCCCTATAAATTTGTTTCATATGGAGATGGTGACAACAATCCTAGTAACACTGAACTTGTCCGTCTTATCACAGCGGATGTTTTTGATGCTGCAGTAGGTGACATTACAATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTGGTGGTAGTAGCATCAGTTAAGAAGATGGATTCCAATGCTTGGGCATTTCTTAAACCATTTACGCCAATGATGTGGACTGTCACAGCTATCTTTTTTCTATTAGTGGGAGCTGTTGTTTGGATTTTAGAGCATAGGCTGAATGATGATTTTAGGGGAACTCCCAAACAACAACTAGTCACAATTTTGTGGTATGGGAATCTGGTCTTTCTCTCTCTCCTCCCTTTCTCAAGCTCACACTATATTGAATCTGTTGTGCATGTTGCAGCAGAATAA 1989 0.4128 MIRVELVALMVLFEGLFSAGAVSDNSTIPALVNIGVLYSFNTSVGKMVKTAVEAAVEDVNSDPSILAQTTLKLSMQEDTKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFIRTAFSDIYEMTAIADLVNYFEWREVIAVYGDDDHGRNGMGALGDKLAERRCKISFKAPMTPEATREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWITTTFLSTWLDINSPLSSDATDDMQGVITLRMYVPDSKLKRWFVSRWTNLTTTAGNTGNGTLGLSTYGIFAYDTVFALAHALDAFFKRGNQITFSHDPKLSQIRGDNMHLDAVKIFNEGNLLRKHIYEVNMTGVSGLFKYASDGNLVNPAYEIINVIGTGTRRVGYWSNYTGLSIVSPEELYSKPPNRSSASQKLLPVFWPGETTQKPRGWVFPNSGRMLRIGVPKRVSYRDFVSHVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFVSYGDGDNNPSNTELVRLITADVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKMDSNAWAFLKPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGTPKQQLVTILWYGNLVFLSLLPFSSSHYIESVVHVAAE* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04243 662 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 646 IPR015683 -
Phac3g04243 662 Pfam Receptor family ligand binding region 48 412 IPR001828 -
Phac3g04243 662 Gene3D - 148 427 - -
Phac3g04243 662 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Phac3g04243 662 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 325 337 - -
Phac3g04243 662 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Phac3g04243 662 Gene3D - 50 402 - -
Phac3g04243 662 SMART GluR_14 475 655 IPR001320 GO:0015276|GO:0016020
Phac3g04243 662 SUPERFAMILY Periplasmic binding protein-like II 449 601 - -
Phac3g04243 662 Gene3D - 585 650 - -
Phac3g04243 662 FunFam Glutamate receptor 148 299 - -
Phac3g04243 662 SUPERFAMILY Periplasmic binding protein-like I 29 466 IPR028082 -
Phac3g04243 662 Pfam Ligated ion channel L-glutamate- and glycine-binding site 490 577 IPR019594 GO:0004970|GO:0016020
Phac3g04243 662 CDD PBP1_GABAb_receptor_plant 33 430 IPR044440 -
Phac3g04243 662 FunFam Glutamate receptor 469 585 - -
Phac3g04243 662 Gene3D - 469 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04243 Phac-Chr3 41105567 41110729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04243 26 636 Ion Channels AT3G51480 56.137 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04243 K05387 - gmx:100788917 1141.33