Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04240 ATGTTCTTGCAGGGAAGACAAGACACCATGAGAAAGATTTGGTTTCTTGTCCTCGTGATGTTCTACCATGGCTTTCCTTCAATGGGAATCAGCAGTGCTTATGGAAAACCAAGAATTGTTAACGTAGGAGCACTTATGTCCTTCAATTCAACAGTTGGGAGAGTGGCTAAAGTTGCTATAGAAGCTGCAGTGGATGATGTAAACTCAGATCCAACTATTCTTAATGGAACCAAGCTAAAGATTTTAACGTTGGACACCAAATTATCCACTGGATTCCTAGGAATAGTTGACTCATTAAGATTGATGGAGAATGACACTGTGGCCATAATTGGTCCCCAGTTCTCAGTGATGGCTCATGTGATTTCACATATTGCAAATGAGATGCAAGTGCCTCTCCTTTCATTTGCAGCAACGGACCCTACGCTGACTTCACTGCAGTTCCCATATTTTGTTAGGACAACACAGAGTGATCTGTATCAGATGACTGCTGTGGCAGAAATTGTTGATCACTTTCAATGGAGAGATGTCATTGCCATTTACATTGATGATGATCATGGAAGAAATGGGGTGTCTGCTTTAGGGGATAAGCTAGCAGAGAAACGTGGTAAAATATCACACAAAGCACCATTTAAGCCTGGTAACATTACTCGGGAGGAAATAAACAGTGCATTAGTTAAGATAGCTTTAATGGAATCAACGGTAATAGTCCTTCACATATACCCTTCTTTTGGTCTAGATGTATTGAATGTGGCTCGGTCACTTGGCATGATGGAAAGTGGCTATGTGTGGATAGCCACAGATTGGCTTTCTACATTGTTAGATTCAAACCCATCATTGTTCACCACTCAATCCATGAATGACATTCAAGGTGTTATTACCTTGCGCATGTACACCCCTGAGTCAGAAATCAAAAGAAAATTTAGTTCTAGTTGGAACAAACTGAGCAAGGAAAAGGATCCTGCTGAGGGTCCTTTCGCATTGAACACCTTTGGCTTTTACGCCTATGATACCGTTTGGGTGCTTGCTTCTGCACTCGATGCGTTTTTCAGGAGTGGGGGAACTTTGTCATTTTCAAATGATTCAAGTCTAAACATGTTAAGAGGGGACAGTCTTCACCTTGATACTATGGGAGTGTTTCTTCATGGTGGGAAGCTGCTTCAACAGATTTTAGAGGTGAACAGAACTGGTCTAACAGGCCAAATGATGTTTGGTGAAGATGGAAACTTAGTGCATTCATCATATGAAGTGATTAACGTGATAGGCACTGGAATTAGGAGGATTGGTTATTGGTCTGAAACTTCTGGCCTCCACACTGGGGAGGATGCTAATCATTCCATTTCTAGTGAAGGACTATATAGTGTCATCTGGCCTGGTCAAACTACTCAAACCCCACGTGGGTGGATTTTTTCCAACAATGGAAGAAACTTGAGAATTGGAGTGCCACTTAGAATTAGTTACCGTGAGTTTGTGTCAAGAACTGAGGGAACTGAGGGAAATGAGATGTTTGGTGGTTATTGCATAGATGTGTTTACTGCTGCTCTCCACTTGGTGCCTTATCCTGTTCCTTACACGTTTGTTCCATTTGGAGATGGTAAAACCAACCCATCAAATTCAAAACTTCTCAACTTGATCACTATTGGGGAGTTTGATGCTGTTGTGGGGGACATTACCATTACCACAAACCGAACTAAGATAGTGGATTTTACCCAGCCATATGTTGAGTCGGGGCTAGTGGTTGTGGCACCTATAAGGAAGATGAAATCCAGTGCTTGGGCTTTCCTGAGACCATTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTAGTTGTGGGAGCTGTTGTATGGATTTTGGAACGTCGCTTAAATGATGACTTCAGAGGCCCAGCTAGAAGGCAGTTTGTGACTGTTTTATGGTTTAGCTTTTCAACCCTGTTTTTTTCTCATCGAGAGAAAACTGTGAGCACCCTTGGTCGCTTAGTGCTGATCATATGGCTGTTTGTGGTTCTGATACTCAACTCAAGCTACATTGCAAGCCTCACCTCCATCCTAACTGTGGAACAGCTCTCTTCCTCAGTTAAGGGAATTGAAAGCTTAGCAACAAGCGATGACCGGATTGGTTTCCTGAGTGGCTCCTTTGCTGAAAATTATCTGACAGAGGAGTTAAACATACACAGATCAAGGCTTGTTCCTCTGAACTCCCCATCAGAATATGAAAAGGCTTTGAAAGATGGCCCTGCTAATGGAGGTGTGACTGCCATAATAGATGAACGTGCATACATGGAACTCTTCCTGGCTACCAGATGTGAATACAGTATTGTTGGGCAAGAATTCACCAAGATGGGATGGGGCTTTGTAAGTGCTTTTGTACTTTTCTTTTCATTCTTCAAACTCCAAACCACTAAAGGATTGAGCATGCTTAAATTGTTACAGGCCTTCCCAAGAGACTCTCCCCTAGCAATTGACATGTCCACTGCCATCTTAAAACTTTCAGAGAATGGTGATCTTCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCATGCAGCTCAGAGGGTGCAAAACAAGGCATAGACCGTCTAGAGCTAAAAAGCTTTTGGGGTCTATTCCTACTTAGTGGCATAGCATGCTTCATTGCTCTCCTTTGCTATGTTGCAAGGATGGCCTACCGATTTAGCAGACACTCCAATACTAACTTGGAGCACTCATCTCAATCCTCTCGTCTTCGATCGTTCCTTTCCTTTGTCAATGAAAGAGAAGGGGAAGACAAAAGTGTGTCAGAGAGAAAACGAACCGAAAAGGGGTCTAGTGGAAGGGTGGCGCACCAAGAAGAAATGGATGGCTCTAGTTACTCAGTAATGGCACATGTGATTTCACACATAGCAAATGAGATGCAAGTACCTCTACTTTCATTTGCAGCAACAGACCCTACACTCACTTCACTGCAGTTCCCATATTTTGTTAGGACAACACAAAGTGATCTGTACCAGATGGCTGCTGTTGCAGAAATTGCTGATCACTTTCAATGGAGAGATGTCATTGCCCTTTACGTTGATGATGATCATGGAAGAAATGGTATAGCAGCCTTAGGGGATAAGCTAGCAGAGAAACGTTGCAAAATATCATATAAAGTACCCTTTAAGCCGGATAATATAACCCGGGAAGAAACAAACAGTGCTCTAATTAAGGTAGCTTTAATGGAGTCTAAGGTAATAATCATTCACATGTACACTTCTTGTGGTCTAGAAGTGCTTCATGCGGCTCAGTCACTTGGCATGATGGGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCTACAGCACTAGATTCAGACCCCTCCTTGTCAACATCTCCAACCATGAATGACATCCAAGGTGTTATCACCTTGCGCATGCACACACCAGAATCAGACATGAAAAGAAAATTTATTTCTAGGTGGGATAAACTGAGCCGAAAAGAAAATTCTAATGAGGACCCTTTTGGATTAAATATCTTTGGTTTCTACGCCTATGACACGGTTTGGGTGCTTGCTTCTGCACTGGATTCATTTTTTAAAGATGGGGGAACTTTGTCATTTTCAAATTATTCAAGTCTAAACATGTTAAGAAGGGACACCCTTAATCTTGATACCATGAGGGTCTTTGTTAATGGTGGCATGTTGCTTCAAAAAGTTTTGAAAGTGAACAGAACTGGTTTAGCTGGTGAGATGGTGTTTAATCCGGATGGAAACTTAGTGCATCCATCATATGAAATCATTAATGTGATAGGCACTGGAATTAGGAGGATTGGTTATTGGTCTGAACCCTCTGGCCTCCATACTGGGGAACATCCTAATCACTACAATTCTAGTGATGGACTTTATGGGGTGATTTGGCCAGGTCAAACGGTTTTTTCCAGCAATGGAAGAACCTTGAGAATTGGGGTGCCACTAAGAATTAGTTACCGTGAGTTTGTGTCAAGAATTGAGGGAACTGAGATGTTTGGTGGTTATTGCATAGATGTGTTCACTGCTGCTCTCAACTTGTTGCCTTATCCTGTTCCCTACAAGTTCATTCCATTTGGTGATGCTAAAACCAACCCATTAAATTCAGATCTTCTTCACATGATAACAATCGGTGCCTTCGATGCTGTGGTGGGAGACATTACCATCACTACTAACCGAACTAAGATAGTGGACTTTACACAGCCATATATTGAGTCTGGGCTAGTTGTTGTGGCACCAATCAAGAAGTTGAAATCCAGTGCTTGGGCTTTCCTATCACCTTTTAGTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTGGTGGTGGGAGCTGTTGTGTGGATTTTAGAGCGTCGCATAAATGATGACTTCAGAGGCCCTGCTAGAAGACAATTTGTCACCATTATTTGGTTTAGCTTCTCAACCCTATTTTTTGCACAAAGAGAAAAAACTGTGAGCACCCTTGGTCGCTTAGTGCTGATCATATGGCTGTTTGTGGTTCTGATACTCAACTCAAGCTACATTGCAAGCCTCACCTCAATCCTAACTGTGGAGCAACTCTCTTCACCGGTTAAAGGAATTGAAAGCTTAGTTATAAGCAACGATCGCATTGGTTTCCTGAGGGGTTCATTTGCCGAAAATTATCTGACAGAGGAGCTAAACATACACAGATCAAGGCTTGTTCCTCTGAACTCCCCATCAGAATATGAAAAGGCTTTGAAAGATGGCCCTGCTAATGGAGGAGTGACTGCCATAATAGATGAACGTGCATACATGGAACTCTTCCTGGCTACCAGATGTGAATACAGTATTGTTGGGCAAGAGTTCACCAAGATGGGATGGGGCTTTGCCTTCCCAAGAGACTCTCCCCTAGCAATTGACATGTCCACTGCCATCTTAAAACTTTCAGAGAATGGTGATCTTCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCATGCAGCTCAGAGGGTGCAAAACAAGGCATAGACCGTCTAGAGCTAAAAAGCTTTTGGGGTCTGTTCCTACTTAGTGGCACAGCATGCTTCATTGCTCTCCTTTGCTATGTTGCAAGGATGGCCTACCGATTTAGCACACACTCCAATACTAACCTCCACCACTCATCTCAATCCTCTCGTCTTCGATCCTTCCTTTCCTTTGTGAATGAAAGAGAAGAGGAAGTGAAATACAGGCCAAAGAGAAGGCGAAAGGAAAAGTGCTCTTGTAGAAAGGTAGTGCACGAAGGTGGATCTTTGGATGACTCAACTGTTAGTGTCCACATAGAAAATAATGCCACTGCGCAAGATTAA 5304 0.4255 MFLQGRQDTMRKIWFLVLVMFYHGFPSMGISSAYGKPRIVNVGALMSFNSTVGRVAKVAIEAAVDDVNSDPTILNGTKLKILTLDTKLSTGFLGIVDSLRLMENDTVAIIGPQFSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMTAVAEIVDHFQWRDVIAIYIDDDHGRNGVSALGDKLAEKRGKISHKAPFKPGNITREEINSALVKIALMESTVIVLHIYPSFGLDVLNVARSLGMMESGYVWIATDWLSTLLDSNPSLFTTQSMNDIQGVITLRMYTPESEIKRKFSSSWNKLSKEKDPAEGPFALNTFGFYAYDTVWVLASALDAFFRSGGTLSFSNDSSLNMLRGDSLHLDTMGVFLHGGKLLQQILEVNRTGLTGQMMFGEDGNLVHSSYEVINVIGTGIRRIGYWSETSGLHTGEDANHSISSEGLYSVIWPGQTTQTPRGWIFSNNGRNLRIGVPLRISYREFVSRTEGTEGNEMFGGYCIDVFTAALHLVPYPVPYTFVPFGDGKTNPSNSKLLNLITIGEFDAVVGDITITTNRTKIVDFTQPYVESGLVVVAPIRKMKSSAWAFLRPFTPMMWFVTGMFFLVVGAVVWILERRLNDDFRGPARRQFVTVLWFSFSTLFFSHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSSVKGIESLATSDDRIGFLSGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVTAIIDERAYMELFLATRCEYSIVGQEFTKMGWGFVSAFVLFFSFFKLQTTKGLSMLKLLQAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLSGIACFIALLCYVARMAYRFSRHSNTNLEHSSQSSRLRSFLSFVNEREGEDKSVSERKRTEKGSSGRVAHQEEMDGSSYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMAAVAEIADHFQWRDVIALYVDDDHGRNGIAALGDKLAEKRCKISYKVPFKPDNITREETNSALIKVALMESKVIIIHMYTSCGLEVLHAAQSLGMMGSGYVWIATDWLSTALDSDPSLSTSPTMNDIQGVITLRMHTPESDMKRKFISRWDKLSRKENSNEDPFGLNIFGFYAYDTVWVLASALDSFFKDGGTLSFSNYSSLNMLRRDTLNLDTMRVFVNGGMLLQKVLKVNRTGLAGEMVFNPDGNLVHPSYEIINVIGTGIRRIGYWSEPSGLHTGEHPNHYNSSDGLYGVIWPGQTVFSSNGRTLRIGVPLRISYREFVSRIEGTEMFGGYCIDVFTAALNLLPYPVPYKFIPFGDAKTNPLNSDLLHMITIGAFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIKKLKSSAWAFLSPFSPMMWFVTGMFFLVVGAVVWILERRINDDFRGPARRQFVTIIWFSFSTLFFAQREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISNDRIGFLRGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVTAIIDERAYMELFLATRCEYSIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLSGTACFIALLCYVARMAYRFSTHSNTNLHHSSQSSRLRSFLSFVNEREEEVKYRPKRRRKEKCSCRKVVHEGGSLDDSTVSVHIENNATAQD* 1768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04240 1767 FunFam Glutamate receptor 994 1152 - -
Phac3g04240 1767 Gene3D - 475 589 - -
Phac3g04240 1767 FunFam Glutamate receptor 590 720 - -
Phac3g04240 1767 Gene3D - 58 411 - -
Phac3g04240 1767 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 957 1702 IPR015683 -
Phac3g04240 1767 FunFam Glutamate receptor 812 844 - -
Phac3g04240 1767 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 53 69 - -
Phac3g04240 1767 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 334 346 - -
Phac3g04240 1767 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Phac3g04240 1767 Gene3D - 1563 1654 - -
Phac3g04240 1767 Gene3D - 798 852 - -
Phac3g04240 1767 Gene3D - 994 1274 - -
Phac3g04240 1767 CDD PBP1_GABAb_receptor_plant 41 436 IPR044440 -
Phac3g04240 1767 FunFam Glutamate receptor 1544 1651 - -
Phac3g04240 1767 Pfam Ligand-gated ion channel 1649 1679 IPR001320 GO:0015276|GO:0016020
Phac3g04240 1767 Gene3D - 156 436 - -
Phac3g04240 1767 FunFam Glutamate receptor 1302 1418 - -
Phac3g04240 1767 Pfam Bacterial extracellular solute-binding proteins, family 3 1367 1648 IPR001638 -
Phac3g04240 1767 Pfam Receptor family ligand binding region 58 421 IPR001828 -
Phac3g04240 1767 Pfam Receptor family ligand binding region 949 1259 IPR001828 -
Phac3g04240 1767 FunFam Glutamate receptor 471 590 - -
Phac3g04240 1767 MobiDBLite consensus disorder prediction 924 942 - -
Phac3g04240 1767 MobiDBLite consensus disorder prediction 924 947 - -
Phac3g04240 1767 CDD GluR_Plant 1305 1647 - -
Phac3g04240 1767 Gene3D - 1299 1417 - -
Phac3g04240 1767 FunFam Glutamate receptor 1418 1548 - -
Phac3g04240 1767 Pfam Bacterial extracellular solute-binding proteins, family 3 536 846 IPR001638 -
Phac3g04240 1767 SUPERFAMILY Periplasmic binding protein-like I 35 467 IPR028082 -
Phac3g04240 1767 SUPERFAMILY Periplasmic binding protein-like II 452 847 - -
Phac3g04240 1767 Pfam Ligand-gated ion channel 847 878 IPR001320 GO:0015276|GO:0016020
Phac3g04240 1767 CDD GluR_Plant 476 845 - -
Phac3g04240 1767 Gene3D - 949 1249 - -
Phac3g04240 1767 SMART GluR_14 477 847 IPR001320 GO:0015276|GO:0016020
Phac3g04240 1767 SMART GluR_14 1308 1649 IPR001320 GO:0015276|GO:0016020
Phac3g04240 1767 SUPERFAMILY Periplasmic binding protein-like II 1295 1649 - -
Phac3g04240 1767 Gene3D - 590 724 - -
Phac3g04240 1767 Gene3D - 1418 1552 - -
Phac3g04240 1767 FunFam Glutamate receptor 156 314 - -
Phac3g04240 1767 SUPERFAMILY Periplasmic binding protein-like I 949 1269 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04240 Phac-Chr3 41085010 41103088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04240 14 932 Ion Channels AT3G51480 55.280 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04240 K05387 - gmx:100790502 1573.14