Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04239 ATGTCGTGTTCTTCTTCATCTGGGTCTGAAGAGGACGATGAGGGGTTCGACTCCTACAGGAAAGGAGGGTACCACGCCGTCAGAGTAGGCGATCAGTTCGCCGGCGGCAGGTTCATAGCGCAGAGGAAGCTGGGTTGGGGTCAGTTTTCTACAGTTTGGCTTGCCTATGATACTTCAACATCTGCATATGTTGCTCTTAAGATCCAGAAAAGTGCGGCCCAATTTGTTCAGGCTGCCCTTCATGAAATTGATGTTCTTGCATCCATTTCTAATGACGTTGATGTTAATTCAAAATGTGTGGTCCAGTTGATTGACCACTTTAAGCACGCAGGTCCTAATGGCCAGCACCTTTGCATGGTGCTTGAGTTTCTTGGGGATAGCTTGCTTCGTCTAATCAAGTATAACCGGTACAAAGGCCTTCCATTGAATAAAGTTAGGGAGATTTGCCACTGCATTTTGTTGGGTTTGGATTATTTGCATAGAGAACATGGTATTATCCACACTGACCTAAAACCAGAAAATGTTCTTCTGATTTCTACCATTGATCCTGCCAAAGACCCTGTTAGATCTGAACTCAGCCCAATATTAGAGAGGCCTGAGGGAAACATAAATGGTGGAGTTACTAGTCTTATTGAGAAAAAATTGAAAAAAAGAGCTAGGAGGGCAGTTGCTAAAATCTCTGGAAGAAACGCTTTAATTGGAGGAAATGAAGATCCAAAGTCTGGGAGAAATCTTGATGGGATTGACGTGAGATGCAAGGTGGTGGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATTCAGACAAGACAGTACAGAGCTCCAGAAGTAATACTGGAGGCTGGCTATTCCTTCTCTGTTGACATGTGGTCTTTCGCTTGCATTGCTTTTGAGCTTGCCACTGGTGATATGTTATTTACGCCCAAAGTTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCACGGAAGGTTGCTATTGCTGGAGCAAAATCCAAGGATTTCTTTGACAGACATGGGGATCTGAAAAGAATTCGAAGACTAAAGTTTTGGCCACTTAGCAAATTGTTGGTTGAAAGATATAAATTTTCAGAGAGTGATGCTCATGCATTTTCAGAGTTTGTTTTACCACTTCTGGATTTCACCCCTGAGAAAAGGCCAACAGCACAGAAGTGTCTGGAACATCCATGGCTGAAGAAAATGGAAAATGAATCTGGTGTGGAGAATCTGGGTGTTGGGATGAGCAATCTTAAAATGGAGGCTGGAAAGTGA 1314 0.4346 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFAGGRFIAQRKLGWGQFSTVWLAYDTSTSAYVALKIQKSAAQFVQAALHEIDVLASISNDVDVNSKCVVQLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICHCILLGLDYLHREHGIIHTDLKPENVLLISTIDPAKDPVRSELSPILERPEGNINGGVTSLIEKKLKKRARRAVAKISGRNALIGGNEDPKSGRNLDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILEAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVAIAGAKSKDFFDRHGDLKRIRRLKFWPLSKLLVERYKFSESDAHAFSEFVLPLLDFTPEKRPTAQKCLEHPWLKKMENESGVENLGVGMSNLKMEAGK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04239 437 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Phac3g04239 437 Gene3D Transferase(Phosphotransferase) domain 1 92 412 - -
Phac3g04239 437 SUPERFAMILY Protein kinase-like (PK-like) 32 416 IPR011009 -
Phac3g04239 437 SMART serkin_6 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04239 437 ProSiteProfiles Protein kinase domain profile. 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04239 437 FunFam Protein kinase superfamily protein 24 123 - -
Phac3g04239 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Phac3g04239 437 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 240 416 - -
Phac3g04239 437 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Phac3g04239 437 Pfam Protein kinase domain 251 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04239 437 Pfam Protein kinase domain 40 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04239 437 FunFam Serine/threonine-protein kinase SRPK 117 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04239 Phac-Chr3 41077814 41082702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04239 4 412 EF-hand Containing Proteins AT5G22840 51.404 1.93e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phac3g04239 Pkinase 5.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04239 K08832 - gmx:100811724 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01845 2 20590599 20594960 Phac3g04239 3 41077814 41082702 PCT