Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04195 ATGGGTGTGTCGCAAAAATGGTTCAGAATTTTTGGGGGGAGATTCTGCAGATCATCCAACAAAGACACCGTTCTCCTCCGCACAACTAACCAATGCGAAGAAGCCATACTTAGGAATGAAGACTTCCCTTTCCCTACACCAACACCAACACCTATCTCTTCAATCACCATGGAAGATGTTGCAGCCATTAAGATCCAAGCTTATTTCAGGGGACATCTGGCAAGAAGAGCATATAAGGCGTTAAAAGGGCTGGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATTGCAATGCAGTGTATGCACGCACTTGTACGATTACAAGTCAGGGTTCGTTCAAGGCAGTTACTTGGTACCTTTCATACACAACCAACCACTAACTCATTTACACACTATAACCACTAG 423 0.4515 MGVSQKWFRIFGGRFCRSSNKDTVLLRTTNQCEEAILRNEDFPFPTPTPTPISSITMEDVAAIKIQAYFRGHLARRAYKALKGLVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRVRSRQLLGTFHTQPTTNSFTHYNH* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04195 140 ProSiteProfiles IQ motif profile. 58 86 IPR000048 GO:0005515
Phac3g04195 140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 102 IPR027417 -
Phac3g04195 140 Pfam IQ calmodulin-binding motif 85 99 IPR000048 GO:0005515
Phac3g04195 140 Pfam IQ calmodulin-binding motif 61 79 IPR000048 GO:0005515
Phac3g04195 140 ProSiteProfiles IQ motif profile. 82 109 IPR000048 GO:0005515
Phac3g04195 140 SMART iq_5 57 79 IPR000048 GO:0005515
Phac3g04195 140 PANTHER IQ-DOMAIN 5-RELATED 42 122 - -
Phac3g04195 140 Gene3D - 58 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04195 Phac-Chr3 40843925 40845723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04195 56 124 IQD Protein Family AT3G51380 73.913 1.85e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04195 - - vun:114179724 191.815