Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04184 ATGGACTCTGTGCCAAATCAATGCCCTTTGACGGGTTCCTTGGGGAATTTCGTTCAGAAGGTCAAAAGGGTTGGTGCCCTCTTCGTTTCTGCCATCATTGGGAACATCTTATCTGCGATCTTGACCTTCTGCTTTGCATTAGTGGGAACTTTGTTGGGGGCCATGACTGGAGCGTTGATAGGCCAAGAGACAGAGAGTGGCTTCATTCGAGGGGCTGCTGTTGGTGCCATATCAGGAGCTGTTTTCTCCATTGAAGTGTTTGAATCTTCCCTTGTTCTTTGGAAATCTGATGAATCTGGAATTGGGTGTGCCTTATACTTGATTGATGTGTTTGCTAGCCTATTGAGTGGGAGACTAGTGCGTGAAAGAATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTATTGAGATAACCTTTGATGAGGTTCAAAACCTCTTTGACATTGGTGTGGCCAAAGGCTTACCGAGAGATTCAGTTGAAAAGATCCCAACCATCACAATTACAAGTGACAACAATGTTGATGCTTCTGGGGAGAGAGTTTCATGTTCTGTTTGCCTCCAGGTTGGGGAGACTGGTAGAAGTTTGCCTCATTGTCATCACATGTTTCACCTACCTTGCATTGATAAGTGGCTGATCAAGCATGCTTCTTGTCCATTATGCAGAAGGGATCTGTGA 687 0.4571 MDSVPNQCPLTGSLGNFVQKVKRVGALFVSAIIGNILSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWKSDESGIGCALYLIDVFASLLSGRLVRERIGPAMLSAVQSQMGAIEITFDEVQNLFDIGVAKGLPRDSVEKIPTITITSDNNVDASGERVSCSVCLQVGETGRSLPHCHHMFHLPCIDKWLIKHASCPLCRRDL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04184 228 ProSiteProfiles Zinc finger RING-type profile. 186 225 IPR001841 -
Phac3g04184 228 FunFam NEP1-interacting protein-like 1 146 228 - -
Phac3g04184 228 SUPERFAMILY RING/U-box 185 228 - -
Phac3g04184 228 Pfam Ring finger domain 185 225 IPR001841 -
Phac3g04184 228 SMART ring_2 186 224 IPR001841 -
Phac3g04184 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 228 IPR013083 -
Phac3g04184 228 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 17 227 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04184 Phac-Chr3 40774403 40776966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04184 18 228 C3H Transcription Factor Family AT5G66070 72.430 2.50e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04184 - - gmx:100816939 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01644 2 16419041 16422105 Phac3g04184 3 40774403 40776966 PCT