Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac3g04183 | ATGGACTCTGTGCCAAATCAATGCCCTTTGACGGGTTCCTTGGGGAATTTCGTTCAGAAGGTCAAAAGGGTTGGTGCCCTCTTCGTTTCTGCCATCATTGGGAACATCTTATCTGCGATCTTGACCTTCTGCTTTGCATTAGTGGGAACTTTGTTGGGGGCCATGACTGGAGCGTTGATAGGCCAAGAGACAGAGAGTGGCTTCATTCGAGGGGCTGCTGTTGGTGCCATATCAGGAGCTGTTTTCTCCATTGAAGTGTTTGAATCTTCCCTTGTTCTTTGGAAATCTGATGAATCTGGAATTGGGTGTGCCTTATACTTGATTGATGTGTTTGCTAGCCTATTGAGTGGGAGACTAGTGCGTGAAAGAATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTATTGAGATAACCTTTGATGAGGTTCAAAACCTCTTTGACATTGGTGTGGCCAAAGGCTTACCGAGAGATTCAGTTGAAAAGATCCCAACCATCACAATTACAAGTGACAACAATGTTGATGCTTCTGGGGAGAGAGTTTCATGTTCTGTTTGCCTCCAGGACTTTCAGGTTGGGGAGACTGGTAGAAGTTTGCCTCATTGTCATCACATGTTTCACCTACCTTGCATTGATAAGTGGCTGATCAAGCATGCTTCTTGTCCATTATGCAGAAGGGATCTGTGA | 696 | 0.4569 | MDSVPNQCPLTGSLGNFVQKVKRVGALFVSAIIGNILSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWKSDESGIGCALYLIDVFASLLSGRLVRERIGPAMLSAVQSQMGAIEITFDEVQNLFDIGVAKGLPRDSVEKIPTITITSDNNVDASGERVSCSVCLQDFQVGETGRSLPHCHHMFHLPCIDKWLIKHASCPLCRRDL* | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac3g04183 | 231 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 151 | 231 | IPR013083 | - | |
Phac3g04183 | 231 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 17 | 230 | IPR044523 | - | |
Phac3g04183 | 231 | FunFam | NEP1-interacting protein-like 1 | 146 | 231 | - | - | |
Phac3g04183 | 231 | SUPERFAMILY | RING/U-box | 185 | 231 | - | - | |
Phac3g04183 | 231 | Pfam | Ring finger domain | 185 | 228 | IPR001841 | - | |
Phac3g04183 | 231 | ProSiteProfiles | Zinc finger RING-type profile. | 186 | 228 | IPR001841 | - | |
Phac3g04183 | 231 | SMART | ring_2 | 186 | 227 | IPR001841 | - | |
Phac3g04183 | 231 | CDD | RING-H2_NIPL1-like | 185 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac3g04183 | Phac-Chr3 | 40774403 | 40776966 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac3g04183 | 18 | 231 | C3H Transcription Factor Family | AT5G66070 | 73.832 | 4.42e-112 | 318 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac3g04183 | - | - | gmx:100816939 | 419.083 |