Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04183 ATGGACTCTGTGCCAAATCAATGCCCTTTGACGGGTTCCTTGGGGAATTTCGTTCAGAAGGTCAAAAGGGTTGGTGCCCTCTTCGTTTCTGCCATCATTGGGAACATCTTATCTGCGATCTTGACCTTCTGCTTTGCATTAGTGGGAACTTTGTTGGGGGCCATGACTGGAGCGTTGATAGGCCAAGAGACAGAGAGTGGCTTCATTCGAGGGGCTGCTGTTGGTGCCATATCAGGAGCTGTTTTCTCCATTGAAGTGTTTGAATCTTCCCTTGTTCTTTGGAAATCTGATGAATCTGGAATTGGGTGTGCCTTATACTTGATTGATGTGTTTGCTAGCCTATTGAGTGGGAGACTAGTGCGTGAAAGAATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTATTGAGATAACCTTTGATGAGGTTCAAAACCTCTTTGACATTGGTGTGGCCAAAGGCTTACCGAGAGATTCAGTTGAAAAGATCCCAACCATCACAATTACAAGTGACAACAATGTTGATGCTTCTGGGGAGAGAGTTTCATGTTCTGTTTGCCTCCAGGACTTTCAGGTTGGGGAGACTGGTAGAAGTTTGCCTCATTGTCATCACATGTTTCACCTACCTTGCATTGATAAGTGGCTGATCAAGCATGCTTCTTGTCCATTATGCAGAAGGGATCTGTGA 696 0.4569 MDSVPNQCPLTGSLGNFVQKVKRVGALFVSAIIGNILSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWKSDESGIGCALYLIDVFASLLSGRLVRERIGPAMLSAVQSQMGAIEITFDEVQNLFDIGVAKGLPRDSVEKIPTITITSDNNVDASGERVSCSVCLQDFQVGETGRSLPHCHHMFHLPCIDKWLIKHASCPLCRRDL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04183 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 231 IPR013083 -
Phac3g04183 231 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 17 230 IPR044523 -
Phac3g04183 231 FunFam NEP1-interacting protein-like 1 146 231 - -
Phac3g04183 231 SUPERFAMILY RING/U-box 185 231 - -
Phac3g04183 231 Pfam Ring finger domain 185 228 IPR001841 -
Phac3g04183 231 ProSiteProfiles Zinc finger RING-type profile. 186 228 IPR001841 -
Phac3g04183 231 SMART ring_2 186 227 IPR001841 -
Phac3g04183 231 CDD RING-H2_NIPL1-like 185 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04183 Phac-Chr3 40774403 40776966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04183 18 231 C3H Transcription Factor Family AT5G66070 73.832 4.42e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04183 - - gmx:100816939 419.083