Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04182 ATGTCTGCTCATGAGATGTCGCTGGAGTTTATTGCAGGCATTTTCGCAGCAATGGTAGTGGCCTTACTCTACTGGCTCTTCAGGAGAAAGGTCATTCCACTTCTTAAGCAACGTAAGACTTTGAAAGGAAAGGAACATAAAAGCTTTGAACATGATACAATACCATTAAGGTATTTTGATTTTAAGGAACTAGAGAGAGCAACAGAAAATTTTAGCCAAGATTGCTTGCTGGGTTCTGGTGCATTTGGAAATGTCTACAAAGGAACCTTTGACTTAGAAGGAACACTAGCCATTAAGAGAGCTCGTTCTGAATCATTCTCAAGTGTGGATGAATTCAGAAATGAAGTTAGGCTCCTTTCAGCTGTAAGGCACAGGAATCTTATTCGTCTGGTTGGATATTGTGAAGAACCAGAACAAGATGGAGCCAAAATACTAGTCTATGAATATGTTCCAAATGGTTCGCTGCTTGAATACATCATGGGAAGCAGAATGAGCTTAACTTGGAGGCGAAGAGTGAAAATAGCAATAGGAGCAGCAAGAGGCATAGCTTATTTGCATGAAGAGGTGAAACCAAGCATAATCCACCGTGACATCAAACCAAGTAACATCCTATTAGGGGAAGGTTTTGAGGCAAAGGTTTCGGATTTTGGGTTAGTAAAATCAGGGCCAACTGGTGATCAGTCACATGTGAGCAGCCAGATTAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTCAAGCTTTCATTTGACCAAATTCAGTGATGTTTATAGCTTTGGTGTCATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCACTAAAAAACAAAGTAATCAACATATTATTGACTGGGCAAGGCCAAGCATAAAGAAGGGCAGTGTTGAAGAAATCATAGATGCAAATCTACTATGTCAAAGTGAGCCATGCAATATGGAAGTTATGCTGAAGATGGGGCAACTTGCTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCAACAATGACTCAGGTCTATCAAGAACTAGAGCGAGCCCTCTACTCAGCTGATAGCTTCAACAGCAACAGACAATCTTCAAAGGGATTTTTTACACCAATTGGCTTATCCCAGCAATCACCAAAGTCGGAGACTCGGGGATCAGTTGAATCATATGATTGTTCACAGAGCTTTGTTAGTATTGATGGTGTTGGATTTCAGAAATTTCATATTGATATGGATAGTTTCTCCTTTAAGAGCACAGACTTAAGGTGCCTAGAAAATAATAGTATTAGTATTGACATGGAGAGAATATAA 1305 0.4031 MSAHEMSLEFIAGIFAAMVVALLYWLFRRKVIPLLKQRKTLKGKEHKSFEHDTIPLRYFDFKELERATENFSQDCLLGSGAFGNVYKGTFDLEGTLAIKRARSESFSSVDEFRNEVRLLSAVRHRNLIRLVGYCEEPEQDGAKILVYEYVPNGSLLEYIMGSRMSLTWRRRVKIAIGAARGIAYLHEEVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSFHLTKFSDVYSFGVILLQLVSARPVVDSTKKQSNQHIIDWARPSIKKGSVEEIIDANLLCQSEPCNMEVMLKMGQLALRCVVEEPKHRPTMTQVYQELERALYSADSFNSNRQSSKGFFTPIGLSQQSPKSETRGSVESYDCSQSFVSIDGVGFQKFHIDMDSFSFKSTDLRCLENNSISIDMERI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04182 434 ProSiteProfiles Protein kinase domain profile. 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04182 434 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 150 353 - -
Phac3g04182 434 CDD STKc_IRAK 77 348 - -
Phac3g04182 434 PANTHER OS01G0750732 PROTEIN 13 362 - -
Phac3g04182 434 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Phac3g04182 434 Gene3D Transferase(Phosphotransferase) domain 1 150 367 - -
Phac3g04182 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Phac3g04182 434 FunFam Putative LRR receptor-like serine/threonine-protein kinase 37 149 - -
Phac3g04182 434 Gene3D Phosphorylase Kinase; domain 1 33 149 - -
Phac3g04182 434 SMART serkin_6 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04182 434 Pfam Protein kinase domain 74 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04182 434 SUPERFAMILY Protein kinase-like (PK-like) 50 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04182 Phac-Chr3 40763508 40766514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04182 57 393 Receptor kinase-like Gene Family AT1G30570 41.003 1.15e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac3g04182 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04182 - - var:108328541 793.882