Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04181 ATGGCAGAAGTTAGGCTCCTTTCAGCTGTAAGGCACAGGAATCTTATTCGTCTGGTTGGATATTGTGAAGAACCAGAACAAGATGGAGCCAAAATACTAGTCTATGAATATGTTCCAAATGGTTCGCTGCTTGAATACATCATGGGAAGCAGAATGAGCTTAACTTGGAGGCGAAGAGTGAAAATAGCAATAGGAGCAGCAAGAGGCATAGCTTATTTGCATGAAGAGGTGAAACCAAGCATAATCCACCGTGACATCAAACCAAGTAACATCCTATTAGGGGAAGGTTTTGAGGCAAAGGTTTCGGATTTTGGGTTAGTAAAATCAGGGCCAACTGGTGATCAGTCACATGTGAGCAGCCAGATTAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTCAAGCTTTCATTTGACCAAATTCAGTGATGTTTATAGCTTTGGTGTCATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCACTAAAAAACAAAGTAATCAACATATTATTGACTGGGCAAGGCCAAGCATAAAGAAGGGCAGTGTTGAAGAAATCATAGATGCAAATCTACTATGTCAAAGTGAGCCATGCAATATGGAAGTTATGCTGAAGATGGGGCAACTTGCTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCAACAATGACTCAGGTCTATCAAGAACTAGAGCGAGCCCTCTACTCAGCTGATAGCTTCAACAGCAACAGACAATCTTCAAAGGGATTTTTTACACCAATTGGCTTATCCCAGCAATCACCAAAGTCGGAGACTCGGGGATCAGTTGAATCATATGATTGTTCACAGAGCTTTGTTAGTATTGATGGTGTTGGATTTCAGAAATTTCATATTGATATGGATAGTTTCTCCTTTAAGAGCACAGACTTAAGGTGCCTAGAAAATAATAGTATTAGTATTGACATGGAGAGAATATAA 969 0.4066 MAEVRLLSAVRHRNLIRLVGYCEEPEQDGAKILVYEYVPNGSLLEYIMGSRMSLTWRRRVKIAIGAARGIAYLHEEVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSFHLTKFSDVYSFGVILLQLVSARPVVDSTKKQSNQHIIDWARPSIKKGSVEEIIDANLLCQSEPCNMEVMLKMGQLALRCVVEEPKHRPTMTQVYQELERALYSADSFNSNRQSSKGFFTPIGLSQQSPKSETRGSVESYDCSQSFVSIDGVGFQKFHIDMDSFSFKSTDLRCLENNSISIDMERI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04181 322 Pfam Protein tyrosine and serine/threonine kinase 1 234 IPR001245 GO:0004672|GO:0006468
Phac3g04181 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Phac3g04181 322 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04181 322 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 38 241 - -
Phac3g04181 322 Gene3D Transferase(Phosphotransferase) domain 1 39 255 - -
Phac3g04181 322 PANTHER OS01G0750732 PROTEIN 2 250 - -
Phac3g04181 322 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
Phac3g04181 322 SUPERFAMILY Protein kinase-like (PK-like) 2 235 IPR011009 -
Phac3g04181 322 SMART serkin_6 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04181 Phac-Chr3 40763508 40766514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04181 2 281 Receptor kinase-like Gene Family AT1G30570 40.569 5.95e-65 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac3g04181 PK_Tyr_Ser-Thr 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04181 - - var:108328541 612.838