Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04178 ATGTCTTATATTTTCTCTAGTCTCCTCTCTATCTTTCTAACAATCATGTCTTGGTCAGAACAAGATGGAGCCAAAATACTAGTCTATGAATATGTTCCAAATGGTTCGCTGCTTGAATACATCATGGGAAGCAGAATGAGCTTAACTTGGAGGCGAAGAGTGAAAATAGCAATAGGAGCAGCAAGAGGCATAGCTTATTTGCATGAAGAGGTGAAACCAAGCATAATCCACCGTGACATCAAACCAAGTAACATCCTATTAGGGGAAGGTTTTGAGGCAAAGGTTTCGGATTTTGGGTTAGTAAAATCAGGGCCAACTGGTGATCAGTCACATGTGAGCAGCCAGATTAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTCAAGCTTTCATTTGACCAAATTCAGTGATGTTTATAGCTTTGGTGTCATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCACTAAAAAACAAAGTAATCAACATATTATTGACTGGGCAAGGCCAAGCATAAAGAAGGGCAGTGTTGAAGAAATCATAGATGCAAATCTACTATGTCAAAGTGAGCCATGCAATATGGAAGTTATGCTGAAGATGGGGCAACTTGCTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCAACAATGACTCAGGTCTATCAAGAACTAGAGCGAGCCCTCTACTCAGCTGATAGCTTCAACAGCAACAGACAATCTTCAAAGGGATTTTTTACACCAATTGGCTTATCCCAGCAATCACCAAAGTCGGAGACTCGGGGATCAGTTGAATCATATGATTGTTCACAGAGCTTTGTTAGTATTGATGGTGTTGGATTTCAGAAATTTCATATTGATATGGATAGTTTCTCCTTTAAGAGCACAGACTTAAGGTGCCTAGAAAATAATAGTATTAGTATTGACATGGAGAGAATATAA 951 0.3996 MSYIFSSLLSIFLTIMSWSEQDGAKILVYEYVPNGSLLEYIMGSRMSLTWRRRVKIAIGAARGIAYLHEEVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSFHLTKFSDVYSFGVILLQLVSARPVVDSTKKQSNQHIIDWARPSIKKGSVEEIIDANLLCQSEPCNMEVMLKMGQLALRCVVEEPKHRPTMTQVYQELERALYSADSFNSNRQSSKGFFTPIGLSQQSPKSETRGSVESYDCSQSFVSIDGVGFQKFHIDMDSFSFKSTDLRCLENNSISIDMERI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04178 316 SUPERFAMILY Protein kinase-like (PK-like) 18 229 IPR011009 -
Phac3g04178 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Phac3g04178 316 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04178 316 SMART serkin_6 3 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04178 316 PANTHER OS01G0750732 PROTEIN 21 244 - -
Phac3g04178 316 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 32 235 - -
Phac3g04178 316 Pfam Protein kinase domain 14 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04178 316 Gene3D Transferase(Phosphotransferase) domain 1 32 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04178 Phac-Chr3 40763508 40766514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04178 12 275 Receptor kinase-like Gene Family AT1G30570 38.868 1.52e-57 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac3g04178 Pkinase 5.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04178 - - var:108328541 567.77