Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04120 ATGTCAGACATAGTGAAGCAACTGTTGGCAAGGCCGATCCAATTGGCTGACCAAGTGACCAAGGCAGCGGAAGAGGCCAATTCCTCTTTCAAGCAAGAGTGCTTAGAACTCAAATCGAATACCGAAAAACTCGCCGGGCTTCTTCGAGAAGCAGCACGTGCCAGCTCCGACCTGTACGAGCGTCCCACGCGGCGTATTATCGCCGACACCGAACTCGTCCTCGACAAGGCTCTATCTTTGGTCCTGAAATGCGGCGCCAACGGCCTCATGAAGCGCGTCTTCAGCATCATTCCGGCGGCGGCGTTTCTCAAGATGTCGTCCCAACTCGAGAATTCCATCGGCGACGTGTTGTGGCTCCTCCGGGTTTCGGCTCCGGCGGAGGATCGCGGTGACGAGTATATCAGCCTCCCTCCGATCGCCGCGAACGATCCCATTTTGGGCTTCATTTGGGGGGAGCTGGCGGCCCTCCAGAAAGGCTCTCTCGACGACCGATCTGACGCAGCTGCCTCGCTCGTGTCGCTAGTACGTGACCACGACCGGAATGGGAAGTTGATCATCGAGGAAGGTGGGGTTGGACCCTTGTTGAAGCTGATCAAGGAGGGTAAAAAAGAGGGTCAAGAGAACGCCGCCAGGGCTATTGGGCTTCTGGGCCGTGACCCTGAGAGCGTGGAGCTTATGATCCATGCCGGGGTGTGCTCTGTCTTCGCTAAAGTCCTGAAAGAAGGTCCCATGAAAGTTCAAGCTGTGGTTGCCTGGGCCGTGTCTGAGTTGGCAGCTAAGTACCCAAAATGTCAAGATCTTTTCGCTCAGCATAATATCGTTCGCTTGCTTGTAAGTCATCTTGCTTTTGAAACCGTTCAGGAGCATAGTAAATACGCAATTGTTAGCAACAAACCCACATCAATCCATGCTGTTGTGATGGCTAGTAATAATTCTAATGGCAATAGTTTGAAAAAGGAGAGTGAATATGAGGAAAAGCTTATGCAAAGTCGCATGCAGCATCCCTTAGGTGATAAGTCCACAAATCAGATGCTTGAAGTGGTCACAAGTACCATGGCAATGCATGCTGCCAACAAGCAGCAGCAACAGTTAAATCAAGACAATGAAGGGACTCAGAACTCACAGGGTGCTCCGCCAAAGGCCAATGGGAATAGTAATGGCAAGCAGTGCCATCAGTCCCACCAGCAAAGCTATACCTACTCTGGAATTAACATGAAGGGAAGGGAACTGGAGGACCCTGAGAATAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCCGGCAGCTTGCCAAGGGCAACGTAGCCATTTGTCGGAGCATCACTGAATCGAGGGCTCTGTTGTGCTTTGCCATTCTCCTTGAGAAAGGGTCTGAAGATGTGAAGTACAATTCTGCCTTGGCAGTGAAGGAGATAACGGCAGTGGCAGAAAAAGACGCAGAATTGAGAAGATCAGCTTTCAAACCCAACTCTCCCGCTTGCAAGGCAATTGTTGATCAAGTGCTTAAGATCATTGACAGGGAAGATACAAAACTCCCGATTCCTTGCATAAAGGCTATAGGGAATTTGGCAAGGACAGTCGGGGCACCAGAGACAAGGATAATTGGACCCTTGGTCCGGCTTCTTGATGAAGGAAGGCCAGAGGTGTCAAGGGAAGCAGCAATCTCTCTCACAAAATTTGCCTCCACGGAAAACTACCTCTGCTTTGATCACTCCAAGGCAATTATAAGTGCTGGTGGTGCAAAGCACTTGGTCCAGCTTGTGTATTTTGGAGAACAGACAGTTCAGATTTCAGCACTAGTTCTGCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTAGGGCCGGGGTTCTTGGAGTTCTTGAATGGGCTTCCAAGCAACCTAAGGTGACGCAGGATGAAACCATCGAGGCTTTGTTGCAGGAATCCAAAGGTAGGCTGGAGCTTTATCAGTCTAGAGGTTCAATTCAAGAGGATTCCAAAAAGTACATCAATAGGAACAGTTAG 2019 0.5022 MSDIVKQLLARPIQLADQVTKAAEEANSSFKQECLELKSNTEKLAGLLREAARASSDLYERPTRRIIADTELVLDKALSLVLKCGANGLMKRVFSIIPAAAFLKMSSQLENSIGDVLWLLRVSAPAEDRGDEYISLPPIAANDPILGFIWGELAALQKGSLDDRSDAAASLVSLVRDHDRNGKLIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMIHAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSNGNSLKKESEYEEKLMQSRMQHPLGDKSTNQMLEVVTSTMAMHAANKQQQQLNQDNEGTQNSQGAPPKANGNSNGKQCHQSHQQSYTYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNVAICRSITESRALLCFAILLEKGSEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAIVDQVLKIIDREDTKLPIPCIKAIGNLARTVGAPETRIIGPLVRLLDEGRPEVSREAAISLTKFASTENYLCFDHSKAIISAGGAKHLVQLVYFGEQTVQISALVLLSYIALHVPDSEELARAGVLGVLEWASKQPKVTQDETIEALLQESKGRLELYQSRGSIQEDSKKYINRNS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04120 672 Gene3D - 152 320 IPR011989 -
Phac3g04120 672 SMART arm_5 177 218 IPR000225 GO:0005515
Phac3g04120 672 SMART arm_5 219 259 IPR000225 GO:0005515
Phac3g04120 672 SMART arm_5 434 474 IPR000225 GO:0005515
Phac3g04120 672 SMART arm_5 568 608 IPR000225 GO:0005515
Phac3g04120 672 FunFam Armadillo repeat only 4 2 122 - -
Phac3g04120 672 MobiDBLite consensus disorder prediction 357 394 - -
Phac3g04120 672 FunFam Armadillo repeat only 2 151 321 - -
Phac3g04120 672 PANTHER ARMADILLO REPEAT ONLY 4 1 658 - -
Phac3g04120 672 Gene3D - 3 122 IPR036537 GO:0007166
Phac3g04120 672 SUPERFAMILY ARM repeat 154 635 IPR016024 -
Phac3g04120 672 Coils Coil 354 374 - -
Phac3g04120 672 Pfam Armadillo/beta-catenin-like repeat 183 215 IPR000225 GO:0005515
Phac3g04120 672 Gene3D - 409 648 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04120 Phac-Chr3 40440707 40442892 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04120 147 281 U-box Gene Family AT3G46510 30.370 9.82e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04120 - - gmx:100794693 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04120 3 40440707 40442892 Phac3g04120 3 40440707 40442892 ECH
Phac2g01729 2 19128239 19130775 Phac3g04120 3 40440707 40442892 PCT