Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04117 ATGATCAGAGCACTTTTTTGCACACCCACTGCTACTTTCTCCGCTCAAAGGGGCTCCTCACGGCAGCGCCACATCAAATTCCGGTCAACTGTATCCTTTGCCACCGCCACCGATGTTCTCAGCCCTCAAAGCACGGCTTCCTGCACCACGCTCTACGAGGTCCTTGGAGTCTGTCCCACTGCGTCAGAAGCAGAAATCAAAGCGGCATACCGGCAACTGGTGAGGGTCTGTCACCCGGACGCGGCTCCGGTGGGGCAAAAAAAATCCTCTGCAGGCGAGTTCATGAAGATCCATAATGCTTATCGCACGCTATTGAATCCCAAGAAGCGTGCCAAGTACAATGAAAGCTTGTTTCCACGTGGACGAGTGGTCTCAACGGCGTCGTCTAGGGTTTCCAACTACAGTGGTCGGAGATGGGAAACTGACCAGTGTTGGTAG 438 0.5388 MIRALFCTPTATFSAQRGSSRQRHIKFRSTVSFATATDVLSPQSTASCTTLYEVLGVCPTASEAEIKAAYRQLVRVCHPDAAPVGQKKSSAGEFMKIHNAYRTLLNPKKRAKYNESLFPRGRVVSTASSRVSNYSGRRWETDQCW* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04117 145 Pfam DnaJ domain 51 114 IPR001623 -
Phac3g04117 145 CDD DnaJ 50 106 IPR001623 -
Phac3g04117 145 SMART dnaj_3 49 109 IPR001623 -
Phac3g04117 145 Gene3D DnaJ domain 36 137 IPR036869 -
Phac3g04117 145 PRINTS DnaJ domain signature 52 70 IPR001623 -
Phac3g04117 145 PRINTS DnaJ domain signature 89 109 IPR001623 -
Phac3g04117 145 PRINTS DnaJ domain signature 70 85 IPR001623 -
Phac3g04117 145 ProSiteProfiles dnaJ domain profile. 50 117 IPR001623 -
Phac3g04117 145 SUPERFAMILY Chaperone J-domain 17 113 IPR036869 -
Phac3g04117 145 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 11 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04117 Phac-Chr3 40406841 40407652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04117 52 114 C2H2 Transcription Factor Family AT1G74250 38.806 3.70e-07 46.6