Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04092 ATGAAGCGAGCAAGGAAATCCAACCGGGTTTCGTGGGCTACTGGAGGGAACCTGTGTCAGGTAAAATTGTTTTTGTCTGACGATTTCCCCTCAAAAGTAGGCCAACATTCTCAAGATCATCTTCAAGTAAAGACATCGATGCTAAATTCCAATTCCAATATAATTGATCCTAGTGATTTGCCCCCTGGGTTTGAAAGCAGTCATTTCCTAAAACAAACAAAGGTTGATTTCTCCAGCATTTCCCCGATAAAATGGGAATGCCCTCTGCCGTTTGTTGTTAGTCCTAAATGGTGTGTTGTAGCGGGTGAAGAAAGTAGGGAGAAAGAGAATCAGAAACTGAGAGAAAATAGGGTGCTTGAAGCTGTTTATCCCCGTCTTTCAGCCATTCCTCCTTGCCCTTCTGTCTCTTTGGACGTAGAAGAGGAAGATTATGATGATGACGTAACTCCCCTCATTCCTATCATTCCCATTGAAGAGGAAGAATCTATGGATATTTTACCTGAAGTTGCAGTAGCTGGGAACCCTTTTCCCTCGGATAACCCTCTGCAGTATATATCTGCTGAAACTTCCATTCGTTCACCCTCTAACTCCTTTTATACTGATTCCTCGGATCCCTGTACAGGGATCCCCTTGGGTGGAGTATCTTTTGGTTTGGAAGCTGATTTGGCAGCTTCGGTTGTTGCAACCATTATGAGGAGTTCTGAGCAAGGGTCCCCGATTGATATGGATTTACTGGTTAAAATATTTAATGATCCAAAAATACTCGACAAGTTGATTAATGAACATAGAACTGCAGCTACCACCATAAGTGCTTCCACCAGTACTGTGGATACCACTCCTAGTGTAAAGCCTGCCATTCCAGTTCTGTTGTCTACATCTGCTGATGTGAAAGCTTCTGGGGCTACACATACAAGTGCAGTGGGTTCATTGCCTTTTGGGCTGAAAACTGCAAATTCATCAGTTGCAGCATTGAGTCCTACACCGGACAAGCCAGCCACTCTGTCAGGGCCTGCAATTCCATCAGTTTCACTGCTGTCTTCGGCTCATGATAATCCTGTTACTGCATCAGTTCCAATGTCTAGGCCTGTATCTGGTAAGCGAGTAACACCCTCAGTTTCATTGCTCACAAATACACCTGCATCTCATATACCCAGGTCTGCTAGCAATCAAATTCACCATGTGTCAAGTGGGATTTCCCCTGCTTTAAATACTCAGTATCAACAAGATACAGCTCTGGCATCTGGGCCAAAGCGAGCCGCCGCAGTGGCGTCCATATGTTCTGGTGAATTAAGCACTTTAAGCACTGGTCCATTGCCATCTCTTACGAGGAACTTGCATGCTGTTGTGAATCCGGTGCAATCCACTGCTAGTACATTGCCTTATAAACTAAGCACAGGTTCATCAGGATTTGCTGTAAAGGATGCCAACTACTATAAAAACCTCATCAGGCAACATGGTGCAGATAAGCAAGATATGCAGGACCCACACATAGGTATTCGTCATAGTAACCTTCAAGATATGAAACCGGTACATAACTTTAAAGAAGGAGAAGTGAAACACAAAATCCAGAAACCATGCATATACTTTAAAAGCTCAAAAGGGTGCCGAAATGGTTTCAATTGCCCCTATCAGCATGATGTTTCAGCTCAGTGGGGAGCTGGTAACATCTTAGGGTCACAGAGTGCAAAAAGATTGAAATCAGGACCTTAG 1710 0.4392 MKRARKSNRVSWATGGNLCQVKLFLSDDFPSKVGQHSQDHLQVKTSMLNSNSNIIDPSDLPPGFESSHFLKQTKVDFSSISPIKWECPLPFVVSPKWCVVAGEESREKENQKLRENRVLEAVYPRLSAIPPCPSVSLDVEEEDYDDDVTPLIPIIPIEEEESMDILPEVAVAGNPFPSDNPLQYISAETSIRSPSNSFYTDSSDPCTGIPLGGVSFGLEADLAASVVATIMRSSEQGSPIDMDLLVKIFNDPKILDKLINEHRTAATTISASTSTVDTTPSVKPAIPVLLSTSADVKASGATHTSAVGSLPFGLKTANSSVAALSPTPDKPATLSGPAIPSVSLLSSAHDNPVTASVPMSRPVSGKRVTPSVSLLTNTPASHIPRSASNQIHHVSSGISPALNTQYQQDTALASGPKRAAAVASICSGELSTLSTGPLPSLTRNLHAVVNPVQSTASTLPYKLSTGSSGFAVKDANYYKNLIRQHGADKQDMQDPHIGIRHSNLQDMKPVHNFKEGEVKHKIQKPCIYFKSSKGCRNGFNCPYQHDVSAQWGAGNILGSQSAKRLKSGP* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04092 569 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 567 - -
Phac3g04092 569 ProSiteProfiles Zinc finger C3H1-type profile. 521 548 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04092 Phac-Chr3 40265905 40275010 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac3g04092 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04092 - - pvu:PHAVU_003G260700g 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04092 3 40265905 40275010 Phac3g04092 3 40265905 40275010 ECH