Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04088 ATGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAACTTGTGGGTTATTATCTCAGGAAAAAAGTTGCTTCTCAGAACATTGATCTTGACGTTATCAAAGAAATAGACCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATTGGGTATGAGGAGCAGAATGAGTGGTATTTCTTTAGTCATAAAGATAAAAAATATCCAACTGGGACTAGAACCAACAGAGCTACCATGGCAGGGTTCTGGAAGGCGACAGGAAGAGACAAATCAGTGTACGAAAGGACCAAACTTATTGGCATGAGAAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAAAAAAGTGATTGGATCATGCACGAGTATAGGCTTGAAACTCTCGAGAATGGACCTCCACAGGAAGAAGGATGGGTTGTGTGCAGAGCCTTCAGGAAAAGAACTAACGGCCAAACAAAGAGTATTGAAGGATGGGATCGAAGCTACATATACGATGAACAAGCATGTGGTGTCAACTCTTCAGTGAACCCTATTGACCTCATGTTAAGGCAACCTCAGAGGAATCAAATTTCAGCTAAAAGTTTCTTGTACAAGCAAGAGATAGAAGCAGAAAATAATTTGAGGTTGATGCATGCAGAAGGAGTGATGCAACTTCCTCAGCTAGAAAGTCCTTCCATGCCATTACTAATATCAGAGAATATTAACAACGAAAATGGTTCCCCAAAGGAATTATCCAACACAAAGAAAGTGACTGATTGGAGGGCACTTGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGAGAGGCATGAAATAGAAGGGATGTCAAGCTTTGCAACTCACACTGGCTCGGACATGGCATTGTTGCTACTCCAGAATACTAATGAAAGGAACAAGTTGAACCCGTTTTTGAATACAAGTTCATCAGACTGTGACATTGGGATATGTGTATTTGAAAAATGA 990 0.4172 MMESCVPPGFRFHPTDEELVGYYLRKKVASQNIDLDVIKEIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETLENGPPQEEGWVVCRAFRKRTNGQTKSIEGWDRSYIYDEQACGVNSSVNPIDLMLRQPQRNQISAKSFLYKQEIEAENNLRLMHAEGVMQLPQLESPSMPLLISENINNENGSPKELSNTKKVTDWRALDKFVASQLSQEERHEIEGMSSFATHTGSDMALLLLQNTNERNKLNPFLNTSSSDCDIGICVFEK* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04088 329 FunFam NAC domain-containing protein 15 159 - -
Phac3g04088 329 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Phac3g04088 329 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Phac3g04088 329 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Phac3g04088 329 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 246 - -
Phac3g04088 329 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04088 Phac-Chr3 40219370 40223285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04088 2 328 NAC Transcription Factor Family AT2G18060 58.583 5.99e-143 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac3g04088 NAM 8.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04088 - - gmx:100797578 518.85