Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04086 ATGGGAAGTGAGGATGTTGGAATAACAAACCCAACTCAAAACAACACACTAAAACCTTCTTCTCTTCTTCTTCCCTGGACTACCATGACTAAATTTCTCATTCTCCTGTTATTCTGCGCACGCTTCTTATCATGCGCCCACTGCGCCTCCGTCACCGAGATCCAAGCCTTGACGTCGTTCAAGCTCAACCTTCACGACCCTCTCGGTGCGCTTAACGCCTGGGACCCGTCAACGCCGTTAGCTCCCTGCGACTGGCGCGGCGTTTATTGCGAAAACGACCGAGTCACCGAGTTACGCCTGCCTCGCCTTCAACTCAGTGGCCAGCTTGGTGACCGCATTTCTGACCTACGCATGCTTCGAAGGCTAAGCCTTCGCTCCAACTCCTTCAACGGCACCATTCCCCACTCCCTCTCCAAATGCACGCTTTTACGCGCCTTGTTCCTGCAGTATAACGACCTCTCCGGCCAACTCCCTTCGGAGATCGGAAACCTCGCCGCTCTCCAGATTCTCAACGTCGCCGGCAACAACCTCTCCGGGAAAATCCCCACCGAACTTCCTCTCCATCTCAAATACGTTGACCTCTCCGCCAACGCCTTCTCCGGCGAGATTCCGACCACCATCCCCGGTCTTTCCGAGCTTCAGCTTATCAACCTCTCCTACAACAAGTTCTCCGGCCAGATTCCGGCGCGCATTGGAGAGCTTCAGAATCTGCAGTACCTTTGGCTCGATCACAATGTTCTCGACGGAACCTTACCTTCGTCTCTCGCGAATTGTTCCTCGCTCGTGCATTTGAGCGTCGAAGGGAACGCGCTCGCCGGGGTGTTACCGGCTGCGATTGCGGCTCTCCCGAACCTCCAGGTGTTGTCACTCGCGCAGAACAACTTCACCGGCACCGTTCCGGCTTCGGTTTTCTGTAACGTGTCTCTCAAAGCGCCGTCACTTCGCATCGTTCAGTTAGGGTTTAACCGTTTCACGGATTTCGCGTGGCCTCAAGCCGCCACGTGTTTCAGTGTTCTTGAGGTTTTGAATGTTCAGCAAAATAGCGTGCGCGGCATGTTTCCGCTGTGGTTAACGAACGTGACCACGCTGTCGGTTCTCGACATTTCTGGTAACTCACTTTCCGGCGAGGTTCCACCGGAAATTGGAAGTCTCTGGAAGTTGGTAGAGTTGAAGATGGCCAATAATTCGTTCTCAGGTGAGATTCCGCCGGAATTAGTAAAATGTAGGTCCCTGCGTGTTGTTGATTTCGAAGGAAATAGGTTTTCCGGTGTGATTCCTTCGTTTATAGGAAATTTGACAGCGCTGAAGGTTCTCTCTCTTGGTGTGAACCATTTCTCTGGTTCTGTTCCGGTGAGTTTTGGTGGGCTCCATTCTCTTGAAACTATGAGTTTAAGGGGTAATAGATTGAATGGTACAATGCCAGAAGAAGTGATGAGGTTGAAGAATTTGACTGTGTTGGACCTCAGTGGAAACCAGTTTTCGGGTCATGTTTCTGGGGAAATTGGGAATCTGAGTAAATTAATGGTTCTGAATCTGAGTGGTAATGGCTTCTATGGAGAAATTCCTTCCACTTTGGGGAATCTTTTCAGGCTCACTACACTTGATTTGAGCAAACAAAATCTCTCCGGCAAATTGCCATATGAAATTTCCGGGCTTCCCAGTTTGCAGGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCTGAAGGGTTTAGCAGCTTGACCAGTTTGAAATATGTGAACCTAAGCTCTAACGAGTTTTCTGGGCATGTTCCTAAGAGCTATGGCTTCCTCCGATCGTTGGTTGTTCTTTCATTGTCTGATAACCGCATCATGGGAATGATTCCCCCGGAAATTGGAAACTGCCCTGACATTGAAATTCTCGAGCTTAGATCAAATCACTTGGGGGGTCCCATTCCCACGGATCTCTCTGGCCTAGCCCATTTGAAAGTCCTTGATTTAGGTAAAAACAATTTAACTGGGGCTTTGCCTGAGGATATCTCCAAATGCTCAGAGTTAACAGTTGTGTTAGCAGATCACAACCAACTTTCGGGTGCTATACCAGGGTCATTGGCCAAGTTATCATACCTAACTATGCTGGATCTCTCGGCCAATAAATTGAGTGGCGAAATTCCCAGTAATCTAAACACCATCCCCGGTTTGGTGTACTTCAATGTCTCAGGCAACAACTTAGAAGGTGAGATTCCACCAATGTTGGGTTCTAAATTCAACAACTCCGCTGTATTTGCAGGCAACCAGAACTTGTGCGGGAAGCCATTGAACAGAAAATGCGAAGAGACAGACAGTAGGGAGAGAAATAGGTTGATAGTGTTAATCATTATCATCGCGGTTGGAGGTTGCTTATTGGCTTTGTGTTGCTGCTTCTACATCACCAGCCTTCTGAGATGGCGCAGAAGGATTAAAGCAGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACAAGTTCAGGAACAAGTCAAGGTCGAAGCAGCACTGACTCCAACGGACCAAAACTCGTCATGTTCAACGCCAAAATCACACTCGCCGAAACAATTGAAGCAACGAGGCAATTCGACGAAGAGAGCGTGCTGAGCAGAACAAAACACGGTTTAGTATTCAAGGCCTGCTACAACGACGGAATGGTTCTTTCCATTCGCAAGCTACAACACGGGTCACTAGACGAAAACATGTTCAGAAAAGAAGCCGAATCGATAGGAAAAATCAGGCACCGAAACCTAACCGTTCTCAGAGGCTACTATGCAGGCCCACCGGATGTTAGACTCCTGGTCTACGATTACATGCCCAATGGGAACCTCGCAACGTTGCTCCAAGAAGCATCACACCTAGATGGTCACGTTCTGAATTGGCCAATGCGACACCTCATTGCATTAGGAATAGCCCGTGGCATCGCGTTTCTACACCAATCCTCACTTGTCCACGGTGACATCAAACCCCAAAACGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGTTGGACAAGTTAACAGTTACCGACCCAGTTGAAGCCTCCACTTCAAGCACTGCTTCAGTTGGCACGTTGGGTTACGTGTCCCCAGAGGCCGTGCTAACAGGGGAACCCACGAAAGAGTGTGACGTCTACAGCTTCGGCATCGTTTTGCTGGAACTTCTCACTGGGAAGAGACCAGTGATGTTCACGCAGGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTACAGAACGGTCAAATTACGGAGCTACTCGAGCCTGGTTTGTTTGAACTTGACCCGGAGTCTTCGGAATGGGAAGAGTTCTTGCTGGGCGTGAAAGTTGGTCTGCTTTGCACAGCACCAGACCCTCTTGATCGACCAACCATGGCTGACATCGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTGCATCCTCCGCTGAACCCACGACGCAACCTTCTCCGGTGTAA 3468 0.4928 MGSEDVGITNPTQNNTLKPSSLLLPWTTMTKFLILLLFCARFLSCAHCASVTEIQALTSFKLNLHDPLGALNAWDPSTPLAPCDWRGVYCENDRVTELRLPRLQLSGQLGDRISDLRMLRRLSLRSNSFNGTIPHSLSKCTLLRALFLQYNDLSGQLPSEIGNLAALQILNVAGNNLSGKIPTELPLHLKYVDLSANAFSGEIPTTIPGLSELQLINLSYNKFSGQIPARIGELQNLQYLWLDHNVLDGTLPSSLANCSSLVHLSVEGNALAGVLPAAIAALPNLQVLSLAQNNFTGTVPASVFCNVSLKAPSLRIVQLGFNRFTDFAWPQAATCFSVLEVLNVQQNSVRGMFPLWLTNVTTLSVLDISGNSLSGEVPPEIGSLWKLVELKMANNSFSGEIPPELVKCRSLRVVDFEGNRFSGVIPSFIGNLTALKVLSLGVNHFSGSVPVSFGGLHSLETMSLRGNRLNGTMPEEVMRLKNLTVLDLSGNQFSGHVSGEIGNLSKLMVLNLSGNGFYGEIPSTLGNLFRLTTLDLSKQNLSGKLPYEISGLPSLQVIALQENKLSGVIPEGFSSLTSLKYVNLSSNEFSGHVPKSYGFLRSLVVLSLSDNRIMGMIPPEIGNCPDIEILELRSNHLGGPIPTDLSGLAHLKVLDLGKNNLTGALPEDISKCSELTVVLADHNQLSGAIPGSLAKLSYLTMLDLSANKLSGEIPSNLNTIPGLVYFNVSGNNLEGEIPPMLGSKFNNSAVFAGNQNLCGKPLNRKCEETDSRERNRLIVLIIIIAVGGCLLALCCCFYITSLLRWRRRIKAAVSGEKKKSPRTSSGTSQGRSSTDSNGPKLVMFNAKITLAETIEATRQFDEESVLSRTKHGLVFKACYNDGMVLSIRKLQHGSLDENMFRKEAESIGKIRHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSLVHGDIKPQNVLFDADFEAHLSDFGLDKLTVTDPVEASTSSTASVGTLGYVSPEAVLTGEPTKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQNGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMADIVFMLEGCRVGPDIASSAEPTTQPSPV* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04086 1155 Gene3D Ribonuclease Inhibitor 500 775 IPR032675 -
Phac3g04086 1155 SMART LRR_typ_2 234 258 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 552 575 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 164 188 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 116 140 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 504 528 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 480 503 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 600 624 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 360 384 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 648 672 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 282 306 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 696 720 IPR003591 -
Phac3g04086 1155 SMART LRR_typ_2 432 455 IPR003591 -
Phac3g04086 1155 Pfam Leucine rich repeat 409 469 IPR001611 GO:0005515
Phac3g04086 1155 Pfam Leucine rich repeat 188 247 IPR001611 GO:0005515
Phac3g04086 1155 Pfam Leucine rich repeat 553 613 IPR001611 GO:0005515
Phac3g04086 1155 Gene3D Transferase(Phosphotransferase) domain 1 936 1144 - -
Phac3g04086 1155 ProSiteProfiles Protein kinase domain profile. 860 1142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04086 1155 ProSitePatterns Serine/Threonine protein kinases active-site signature. 980 992 IPR008271 GO:0004672|GO:0006468
Phac3g04086 1155 MobiDBLite consensus disorder prediction 814 839 - -
Phac3g04086 1155 Gene3D Ribonuclease Inhibitor 50 186 IPR032675 -
Phac3g04086 1155 SUPERFAMILY L domain-like 50 298 - -
Phac3g04086 1155 SUPERFAMILY L domain-like 335 603 - -
Phac3g04086 1155 MobiDBLite consensus disorder prediction 818 839 - -
Phac3g04086 1155 Pfam Leucine rich repeat N-terminal domain 53 90 IPR013210 -
Phac3g04086 1155 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 936 1141 - -
Phac3g04086 1155 Gene3D Phosphorylase Kinase; domain 1 823 935 - -
Phac3g04086 1155 SUPERFAMILY L domain-like 521 760 - -
Phac3g04086 1155 SMART LRR_sd22_2 696 719 - -
Phac3g04086 1155 SMART LRR_sd22_2 648 671 - -
Phac3g04086 1155 SMART LRR_sd22_2 282 309 - -
Phac3g04086 1155 SMART LRR_sd22_2 480 506 - -
Phac3g04086 1155 SMART LRR_sd22_2 234 257 - -
Phac3g04086 1155 FunFam Putative LRR receptor-like serine/threonine-protein kinase 51 186 - -
Phac3g04086 1155 SUPERFAMILY Protein kinase-like (PK-like) 840 1140 IPR011009 -
Phac3g04086 1155 FunFam Inactive leucine-rich repeat receptor-like protein kinase 187 277 - -
Phac3g04086 1155 Gene3D Ribonuclease Inhibitor 282 499 IPR032675 -
Phac3g04086 1155 Pfam Protein kinase domain 870 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04086 1155 FunFam Uncharacterized protein 282 494 - -
Phac3g04086 1155 SMART serkin_6 860 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04086 1155 FunFam Putative LRR receptor-like serine/threonine-protein kinase 823 935 - -
Phac3g04086 1155 Pfam Leucine Rich Repeat 650 672 IPR001611 GO:0005515
Phac3g04086 1155 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 495 770 - -
Phac3g04086 1155 PANTHER LEUCINE RICH REPEAT KINASE 2 574 1135 - -
Phac3g04086 1155 Gene3D Ribonuclease Inhibitor 187 277 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04086 Phac-Chr3 40206418 40210432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04086 32 1155 Receptor kinase-like Gene Family AT4G36180 66.109 0.0 1452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Phac3g04086 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04086 - - vun:114175753 2083.92