Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04080 ATGTGTAATAAGCTAGCAAGCCGGCATGTAAGGGTTGGTCTAGCAAGTCCAAGTGATGTACCGCGCTGCGACATTTGTGAGAATGCACCTGCTTTCTTCTATTGTGAGACAGATGGAAGTTCCCTCTGTTTGCAGTGTGATATGATTGTTCATGTTGGAGGTAAAAGGACACACGAAAGATATCTTCTTTTTAGGCAGAGAGTTGAGTTTCCAGGAGATAAACCTGGTAAGTCAGAAAACCCAGCTTCACAACCTCTGGATCCAGGTGAGACTAAAAGAGGACAAAATGCACTGCCCAAAATAAAAATGGGAGAGAAACAGCAAAATTACAGGATGCCTCTGATTCTGACGCCAGAACCTAATGCTGATGAGCATGCCATGATGGGAACCAAAATGATTGATTTGAACATGAAGCCTCAGAGAATACATGAGCCAACATCAAATAATCAGCAATAA 456 0.4254 MCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHERYLLFRQRVEFPGDKPGKSENPASQPLDPGETKRGQNALPKIKMGEKQQNYRMPLILTPEPNADEHAMMGTKMIDLNMKPQRIHEPTSNNQQ* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04080 151 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 95 - -
Phac3g04080 151 SUPERFAMILY B-box zinc-binding domain 15 54 - -
Phac3g04080 151 SMART bboxneu5 18 63 IPR000315 GO:0008270
Phac3g04080 151 ProSiteProfiles Zinc finger B-box type profile. 18 63 IPR000315 GO:0008270
Phac3g04080 151 MobiDBLite consensus disorder prediction 70 111 - -
Phac3g04080 151 Pfam B-box zinc finger 19 59 IPR000315 GO:0008270
Phac3g04080 151 CDD Bbox1_BBX-like 23 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04080 Phac-Chr3 40173440 40177749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04080 1 150 C2C2-CO-like Transcription Factor Family AT4G38960 57.333 7.85e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac3g04080 zf-B_box 7.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04080 - - vun:114176173 316.62