Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04078 ATGCAAAACAACACACCTTCAACTTCAATTATGCGAACGCTTTGTGATGCTTGTGAGAGCGCCGCCGCTATCGTTTTCTGCGCCGCCGATGAGGCCGCCCTATGCCGTGCCTGTGATAAGAAGGTTCACATGTGTAATAAGCTAGCAAGCCGGCATGTAAGGGTTGGTCTAGCAAGTCCAAGTGATGTACCGCGCTGCGACATTTGTGAGAATGCACCTGCTTTCTTCTATTGTGAGACAGATGGAAGTTCCCTCTGTTTGCAGTGTGATATGATTGTTCATGTTGGAGGTAAAAGGACACACGAAAGATATCTTCTTTTTAGGCAGAGAGTTGAGTTTCCAGGAGATAAACCTGGTAAGTCAGAAAACCCAGCTTCACAACCTCTGGATCCAGGTGAGACTAAAAGAGGACAAAATGCACTGCCCAAAATAAAAATGGGAGAGAAACAGCAAAATTACAGGATGCCTCTGATTCTGACGCCAGAACCTAATGCTGATGAGCATGCCATGATGGGAACCAAAATGATTGATTTGAACATGAAGCCTCAGAGAATACATGAGCCAACATCAAATAATCAGTATTACAGTTAA 591 0.445 MQNNTPSTSIMRTLCDACESAAAIVFCAADEAALCRACDKKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHERYLLFRQRVEFPGDKPGKSENPASQPLDPGETKRGQNALPKIKMGEKQQNYRMPLILTPEPNADEHAMMGTKMIDLNMKPQRIHEPTSNNQYYS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04078 196 SMART bboxneu5 10 57 IPR000315 GO:0008270
Phac3g04078 196 SMART bboxneu5 61 106 IPR000315 GO:0008270
Phac3g04078 196 FunFam B-box zinc finger protein 19 12 102 - -
Phac3g04078 196 CDD Bbox1_BBX-like 66 106 - -
Phac3g04078 196 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
Phac3g04078 196 Pfam B-box zinc finger 13 52 IPR000315 GO:0008270
Phac3g04078 196 Pfam B-box zinc finger 62 102 IPR000315 GO:0008270
Phac3g04078 196 ProSiteProfiles Zinc finger B-box type profile. 61 106 IPR000315 GO:0008270
Phac3g04078 196 Gene3D Classic Zinc Finger 11 105 - -
Phac3g04078 196 CDD Bbox1_BBX-like 14 57 - -
Phac3g04078 196 PANTHER B-BOX ZINC FINGER PROTEIN 22 11 136 - -
Phac3g04078 196 SUPERFAMILY B-box zinc-binding domain 58 97 - -
Phac3g04078 196 MobiDBLite consensus disorder prediction 115 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04078 Phac-Chr3 40168390 40177749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04078 11 193 C2C2-CO-like Transcription Factor Family AT4G38960 62.295 1.93e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Phac3g04078 zf-B_box 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04078 - - vun:114176173 398.282