Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04037 ATGTCAGCGGAATCGTCCAAGCGCCACCAATGGCAGTGGGAGAACGCCACCGCCGGCGCTGCTGCTGGATTCGCCACCGTCGCCGTTATGCATCCCCTTGATGTTGTTCGAACTAGGTTCCAAGTTAACGATGGTCGAGTCTCGAATCTTCCCGGTTACAAGAACACTGCTCACGCCATTTTCACCATTGCTCGATCCGAGGGATTAAGAGGCTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCTACCATTTCATGGGGTTTATATTTCTTTTTCTATGACAAAGCCAAACAAAGATATGCAAGGAACAGGGAGGGGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTCCTTGTGCACAAATCCTGTCTGGGTAGTAAAAACAAGATTGCAGCTTCAAACTCCACTTCATCAGACACGTCCATACTCTGGGATTTATGATGCATTTAAGACCATACTGAGGGAAGAAGGATTTAGTGCACTTTACAAAGGGATTGTTCCCGGCCTATTTCTGGTTTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAACTGCGTAAAATTACTGTTGATTTTAGGAGTAAGAGAAGTACAGTTCATAATCAAAACCCTGATAAATTGCTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTTGCTGCGATACTGCTAACCTATCCATTTCAGGTTATGCGAGCCCGATTGCAGCAACGACCTAGTGGTGATGGGGTTCCAAGATATAAGGACACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTGTTCGTGGTTATTACAAAGGAATTACCGCAAACCTGTTGAAGAATGCTCCTGCTTCTTCAATAACATTCATTGTGTATGAAAATGTTCTAAAATTGCTTAAACCGACTAGAAGGAATGACTGA 945 0.4444 MSAESSKRHQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSNLPGYKNTAHAIFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREGKLSPGLHLASAAEAGGLVSLCTNPVWVVKTRLQLQTPLHQTRPYSGIYDAFKTILREEGFSALYKGIVPGLFLVSHGAIQFTAYEELRKITVDFRSKRSTVHNQNPDKLLNSVDYAVLGATSKLAAILLTYPFQVMRARLQQRPSGDGVPRYKDTWHVVKETARFEGVRGYYKGITANLLKNAPASSITFIVYENVLKLLKPTRRND* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04037 314 SUPERFAMILY Mitochondrial carrier 12 302 IPR023395 -
Phac3g04037 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Phac3g04037 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Phac3g04037 314 FunFam Folate transporter 1, chloroplastic 106 312 - -
Phac3g04037 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Phac3g04037 314 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Phac3g04037 314 Gene3D Mitochondrial carrier domain 1 196 IPR023395 -
Phac3g04037 314 PRINTS Mitochondrial carrier protein signature 25 43 IPR002067 GO:0055085
Phac3g04037 314 PRINTS Mitochondrial carrier protein signature 118 140 IPR002067 GO:0055085
Phac3g04037 314 PRINTS Mitochondrial carrier protein signature 73 91 IPR002067 GO:0055085
Phac3g04037 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 309 IPR044712 GO:0006862|GO:0055085
Phac3g04037 314 Pfam Mitochondrial carrier protein 109 197 IPR018108 -
Phac3g04037 314 Pfam Mitochondrial carrier protein 220 308 IPR018108 -
Phac3g04037 314 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04037 Phac-Chr3 39862175 39869881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04037 32 308 Chloroplast and Mitochondria Gene Families AT1G25380 36.170 1.25e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04037 K15115 - gmx:100809599 571.622