Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04032 ATGGAATTTGCTAGTTTCCATCTTCAGCATCAGCTTCAAGAAGAATCTGCTCAGTGTATAACTTCAGCAACCCCACCACCTGACTCTAAACCTTCCATTACCACTAGTCAATCATGGATCCCAAGCAACATGTACAATGGTTGTAACAGTGGCTTTCTAACTGAGAGCTTTACAAATTCAAGAGAACTACAGCACAAGCACGCCATGACTGATTCACTTAGAATTTCAACAAGGCAAGCCTTTGGTTTCCACAATGGAAAAAGCCTCGCTCAACAGCCAGTTAGTGATCTCTTTCCAGCAAGAATGAGAGGTGAAATGATCAACACCTCCATGAAGGCTATGGAGGAATCATGTTCACTAATCCCAGTTCATGAACTACGATATCCTCCTAGTTTCTTATCTAGTCTTGGTGTAACTGGTCCAGAGTTTGTTCCTGCGGAGAATGTTTTTCATAATAACAAGTCTATTGATGGAAGGATACAAAGCAAGAGATATAACAACTTTGGCGATGCTAGCTTAATTTCCAATTTACCAACCCTAGATATGACCTCTTCCTTGGTTTCATGTTCTTTGGGTTTAAATCCTAAAATGTTTGATCTGCATACAAGCTATAGTGAGAGTTGTGAAATCCAACCTTGCTATGATACTTTTGGTCTAAACGAGAGCATAGCTTTGTGCCACAGCGACATGCATGGCAACGAAAATAGTCCATCAAATACCTCAAAAATTTCATCGTTTATAAGTGAAGTTGCAACAACGAAAAGGCCTAGCAATTGCTCTCTACCAAAAGAATCTGAGGCCAAAGCTAAGAAGTCAAGGCCATCTTCATGCCCTCCCCTGAAGCAGATAAGAAAGGAAAAATTAGGGGATAGGATTCAAACTCTTCAAAGATTAGTGGCACCTTTCGGGAAGACCAGTACAGCCTCTGTCTTAAGTGAAGCCATTGGCTACATCCATTTCCTTCACCAACAAATCCAGACTTTGAGCATTCCTTACATGAAATCCACGCAAAGCAACAGAATGATGCAGCTGGGTAGCAAAGAACTGAAGACAGACCTAAGAAGCAGAGGCTTGTGCCTTGTGCCCTTTTCTTACGCATCATTTATTCATCGTTGTGTTTAG 1122 0.4127 MEFASFHLQHQLQEESAQCITSATPPPDSKPSITTSQSWIPSNMYNGCNSGFLTESFTNSRELQHKHAMTDSLRISTRQAFGFHNGKSLAQQPVSDLFPARMRGEMINTSMKAMEESCSLIPVHELRYPPSFLSSLGVTGPEFVPAENVFHNNKSIDGRIQSKRYNNFGDASLISNLPTLDMTSSLVSCSLGLNPKMFDLHTSYSESCEIQPCYDTFGLNESIALCHSDMHGNENSPSNTSKISSFISEVATTKRPSNCSLPKESEAKAKKSRPSSCPPLKQIRKEKLGDRIQTLQRLVAPFGKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKSTQSNRMMQLGSKELKTDLRSRGLCLVPFSYASFIHRCV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04032 373 MobiDBLite consensus disorder prediction 15 35 - -
Phac3g04032 373 CDD bHLH_AtbHLH_like 284 329 IPR045239 -
Phac3g04032 373 Gene3D - 280 350 IPR036638 GO:0046983
Phac3g04032 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 272 321 IPR011598 GO:0046983
Phac3g04032 373 SMART finulus 278 327 IPR011598 GO:0046983
Phac3g04032 373 MobiDBLite consensus disorder prediction 254 283 - -
Phac3g04032 373 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 124 367 - -
Phac3g04032 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 273 335 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04032 Phac-Chr3 39817302 39821262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04032 236 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 50.000 5.02e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04032 - - vum:124832810 677.167