Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04031 ATGGAATTTGCTAGTTTCCATCTTCAGCATCAGCTTCAAGAAGAATCTGCTCAGTGTATAACTTCAGCAACCCCACCACCTGACTCTAAACCTTCCATTACCACTAGTCAATCATGGATCCCAAGCAACATGTACAATGGTTGTAACAGTGGCTTTCTAACTGAGAGCTTTACAAATTCAAGAGAACTACAGCACAAGCACGCCATGACTGATTCACTTAGAATTTCAACAAGGCAAGCCTTTGGTTTCCACAATGGAAAAAGCCTCGCTCAACAGCCAGTTAGTGATCTCTTTCCAGCAAGAATGAGAGGTGAAATGATCAACACCTCCATGAAGGCTATGGAGGAATCATGTTCACTAATCCCAGTTCATGAACTACGATATCCTCCTAGTTTCTTATCTAGTCTTGGTGTAACTGGTCCAGAGTTTGTTCCTGCGGAGAATGTTTTTCATAATAACAAGTCTATTGATGGAAGGATACAAAGCAAGAGATATAACAACTTTGGCGATGCTAGCTTAATTTCCAATTTACCAACCCTAGATATGACCTCTTCCTTGGTTTCATGTTCTTTGGGTTTAAATCCTAAAATGTTTGATCTGCATACAAGCTATAGTGAGAGTTGTGAAATCCAACCTTGCTATGATACTTTTGGTCTAAACGAGAGCATAGCTTTGTGCCACAGCGACATGCATGGCAACGAAAATAGTCCATCAAATACCTCAAAAATTTCATCGTTTATAAGTGAAGTTGCAACAACGAAAAGGCCTAGCAATTGCTCTCTACCAAAAGAATCTGAGGCCAAAGCTAAGAAGTCAAGGCCATCTTCATGCCCTCCCCTGAAGATAAGAAAGGAAAAATTAGGGGATAGGATTCAAACTCTTCAAAGATTAGTGGCACCTTTCGGGAAGACCAGTACAGCCTCTGTCTTAAGTGAAGCCATTGGCTACATCCATTTCCTTCACCAACAAATCCAGACTTTGAGCATTCCTTACATGAAATCCACGCAAAGCAACAGAATGATGCAGCTGGGTAGCAAAGAACTGAAGACAGACCTAAGAAGCAGAGGCTTGTGCCTTGTGCCCTTTTCTTACGCATCATTTATTCATCGTTGTGTTTAG 1119 0.412 MEFASFHLQHQLQEESAQCITSATPPPDSKPSITTSQSWIPSNMYNGCNSGFLTESFTNSRELQHKHAMTDSLRISTRQAFGFHNGKSLAQQPVSDLFPARMRGEMINTSMKAMEESCSLIPVHELRYPPSFLSSLGVTGPEFVPAENVFHNNKSIDGRIQSKRYNNFGDASLISNLPTLDMTSSLVSCSLGLNPKMFDLHTSYSESCEIQPCYDTFGLNESIALCHSDMHGNENSPSNTSKISSFISEVATTKRPSNCSLPKESEAKAKKSRPSSCPPLKIRKEKLGDRIQTLQRLVAPFGKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKSTQSNRMMQLGSKELKTDLRSRGLCLVPFSYASFIHRCV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04031 372 Gene3D - 281 349 IPR036638 GO:0046983
Phac3g04031 372 MobiDBLite consensus disorder prediction 15 35 - -
Phac3g04031 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 281 334 IPR036638 GO:0046983
Phac3g04031 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 271 320 IPR011598 GO:0046983
Phac3g04031 372 MobiDBLite consensus disorder prediction 255 281 - -
Phac3g04031 372 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 124 366 - -
Phac3g04031 372 CDD bHLH_AtbHLH_like 283 328 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04031 Phac-Chr3 39817302 39821262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04031 236 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 50.350 9.87e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04031 - - vum:124832810 670.618