Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03999 ATGATGCATCGTTGTTGCGGGAACTCCCAGGGTCACGTGATGGGCACCTGCACATGCAGCATGTTTCACAGTGAAACAAACTCCTACTCGATGCTCTTTTCTATGCCCAACACCCACGGTCCCTATGATGATTACGAACACGACATGTATTCCTCCTACACGCCCTCTCCTTCTTCCGTGGACTGCACGCTCTCCCTCGGAACCCCTTCCACGCGTTTCACTGAAGGCGAGGAGCTACGAAACCGTCACGAACCTCGCTCTTCCGTCACCAACTTCTGCTGGGACTTGCTCCAATCCAAACACACCACGCAATCTCAAACCAATAAATCCACCAGAGGAACCAATGGCGGCTCCAACAACGACCCTCTCCTCGCTCGTCGTTGCGCCAACTGTGATACCACTTCCACTCCCCTCTGGAGAAACGGTCCTCGTGGCCCAAAGTCACTATGCAATGCTTGCGGGATCAGATATAAAAAGGAAGAGAGAAGAGCAAGCGCTGCAGCCGCCACGTCTGCAGCAGTTCCCAGCAGCGTAATGGAATCGTCGCGCTCTTACGGCAACCAAAGCAGTTCGTGGTACGCACACTCGCAGATGGGTAACGAGTTACGTTTCATGGAGGATTCTGACGATAGAGATTCGGACAATGGCATTCCGTTCTTCTCATGGAACCTTAACGTTCCAGACCGAACGAGCCTCGTGCACGACTTCACGAGATGA 717 0.5328 MMHRCCGNSQGHVMGTCTCSMFHSETNSYSMLFSMPNTHGPYDDYEHDMYSSYTPSPSSVDCTLSLGTPSTRFTEGEELRNRHEPRSSVTNFCWDLLQSKHTTQSQTNKSTRGTNGGSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEERRASAAAATSAAVPSSVMESSRSYGNQSSSWYAHSQMGNELRFMEDSDDRDSDNGIPFFSWNLNVPDRTSLVHDFTR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03999 238 MobiDBLite consensus disorder prediction 101 122 - -
Phac3g03999 238 MobiDBLite consensus disorder prediction 101 121 - -
Phac3g03999 238 SMART GATA_3 122 176 IPR000679 GO:0006355|GO:0043565
Phac3g03999 238 Gene3D - 124 188 IPR013088 GO:0006355|GO:0008270
Phac3g03999 238 Pfam GATA zinc finger 128 162 IPR000679 GO:0006355|GO:0043565
Phac3g03999 238 ProSitePatterns GATA-type zinc finger domain. 128 153 IPR000679 GO:0006355|GO:0043565
Phac3g03999 238 PANTHER GATA TRANSCRIPTION FACTOR 18 11 238 IPR044272 GO:0003700|GO:0009908
Phac3g03999 238 CDD ZnF_GATA 127 159 IPR000679 GO:0006355|GO:0043565
Phac3g03999 238 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 125 164 - -
Phac3g03999 238 ProSiteProfiles GATA-type zinc finger domain profile. 122 158 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03999 Phac-Chr3 39536251 39538739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03999 6 238 C2C2-Gata Transcription Factor Family AT3G50870 43.007 5.99e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac3g03999 GATA 6.6e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03999 - - gmx:100799154 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03999 3 39536251 39538739 Phac3g03999 3 39536251 39538739 ECH