Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac3g03978 | ATGTCTTCCCCTAATAAGAAATCAGCTCCCCATAACAACACACCCGATAACGCCACCCCCGATGACGCCACCCCCGATAACGCCACTCCCGACAATGCCATACCCGACAATGCCACGCCCGACAATGCCACACCCGACAATGCCACGCCCGACAATGCCACGCCCGACAATGCCACGCCCGACAATGCCACGCCCGATAATTCAAACGGATCACATAAGGGTTCCTCATCGTCGTCGTCGTCGTCGTCCACTCCTTCAGCCAAAGAGCCGCACAAAGCGCTGTCGCATGAAAGGATGTCGAATACAGAGAAAGACAATGGTGGCACCGATAAAGCAGCATTGGGAGCTGGGATTGGAGTTGGGTTTGTCCTTCTCGTGTTGATCATTGTGTGTTTTATTTGGTGTTGCAGGAGGAAGAAGCGAAAGCAGAAGAAGTTCTACTACGCATCTCCTTCTAAAGGAAAAGGCAATTATTACAACACTGGGCAAAATTCTCTCCCTAAATGGCAACAAGGACCGGGTCCTCTCGGGAATGACCATGTGGTGAGGGTTCAACAACAAGGGATGGGGATGCAGATGGGAATGGGAATGCAGATGGGAATGGGAATGGGAATGGGTCCTCCTAGTGGTGGTGGTGGTGGTGGCTGGGGTACATCCCATCCCCAAATGAGCAGTGGTGATATGAGCTCTAATTACTCAGTGGGAATGGGTTCCACATCGCCAGGCCTTTCTCTCACACTCAAGGGTGGTACCTTCACTTATGAGGAGCTAGCAGCTGCCACCAAAGGATTTGCCAATGACCAGATTATTGGACAAGGTGGCTTTGGCTATGTCCATAAGGGAGTTTTACCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTAAAAGCAGGTAGTGGACAAGGAGAACGCGAGTTCCAAGCTGAGATTGACATCATTAGTCGAGTTCATCATCGTCATCTTGTGTCACTTGTTGGATATTGCATTTGTGGAGGCCAAAGAATGTTGGTCTATGAATTTGTTCCCAACTCAACTTTGGAACATCACCTTCATGGAAAAGGTATGCCTACCATGGATTGGCCTACTAGAATGCGAATTGCAATGGGATCTGCCAAAGGGCTTGCCTACCTTCATGAAGATTGTAGCCCTCGCATTATCCATCGTGACATTAAAGCTTCTAACGTTCTTCTTGATGATAGCTTTGAAGCAAAGGTGTCTGATTTTGGACTCGCAAAGTTGACCTCTGATAATAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGGTACTTGGCCCCAGAATACGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTCATGCTATTGGAACTCATAACCGGGAAACGGCCTGTAGATTCGTCAAATGTCATGGAGGACAGTTTAGTGGATTGGGCTCGACCACTCCTGAATAAAGGATTGGAGGATGGCAACTTTGGAGGGTTGGTGGATCCATTTTTGGAAGGCAACTACAATACCCAGGAAATGACAAGAATGGCAGCTTGCGCAGCTGCAAGCATTCGTCATTCGGCTAGGAAGCGTTCAAAAATGAGCCAGATTGTGAGAGCGCTGGAAGGAGATGTGTCATTGGAAGACTTGAAAGAAGGAACGAAACTTGCAGGGAATGGGAATAATGGGAATAGCAGTGCTTTCATTTCTTCATCTGGAAGCTCAGAATATGATACCATGCAATACAATGCTGATATGATTAAGTTCAGACAGGCAATAATGTCGAGCCAAGAATTTAATGACAGTGGTGAGCTTTCCAGTAAGGAGATGGCTTATCATTAG | 1827 | 0.4735 | MSSPNKKSAPHNNTPDNATPDDATPDNATPDNAIPDNATPDNATPDNATPDNATPDNATPDNATPDNSNGSHKGSSSSSSSSSTPSAKEPHKALSHERMSNTEKDNGGTDKAALGAGIGVGFVLLVLIIVCFIWCCRRKKRKQKKFYYASPSKGKGNYYNTGQNSLPKWQQGPGPLGNDHVVRVQQQGMGMQMGMGMQMGMGMGMGPPSGGGGGGWGTSHPQMSSGDMSSNYSVGMGSTSPGLSLTLKGGTFTYEELAAATKGFANDQIIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCICGGQRMLVYEFVPNSTLEHHLHGKGMPTMDWPTRMRIAMGSAKGLAYLHEDCSPRIIHRDIKASNVLLDDSFEAKVSDFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDSSNVMEDSLVDWARPLLNKGLEDGNFGGLVDPFLEGNYNTQEMTRMAACAAASIRHSARKRSKMSQIVRALEGDVSLEDLKEGTKLAGNGNNGNSSAFISSSGSSEYDTMQYNADMIKFRQAIMSSQEFNDSGELSSKEMAYH* | 609 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac3g03978 | 608 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 340 | 547 | - | - | |
Phac3g03978 | 608 | MobiDBLite | consensus disorder prediction | 90 | 105 | - | - | |
Phac3g03978 | 608 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 122 | 587 | IPR047117 | - | |
Phac3g03978 | 608 | Pfam | Protein tyrosine and serine/threonine kinase | 267 | 467 | IPR001245 | GO:0004672|GO:0006468 | |
Phac3g03978 | 608 | MobiDBLite | consensus disorder prediction | 159 | 178 | - | - | |
Phac3g03978 | 608 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Phac3g03978 | 608 | ProSitePatterns | Protein kinases ATP-binding region signature. | 270 | 292 | IPR017441 | GO:0005524 | |
Phac3g03978 | 608 | SMART | serkin_6 | 264 | 499 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac3g03978 | 608 | Gene3D | Phosphorylase Kinase; domain 1 | 238 | 339 | - | - | |
Phac3g03978 | 608 | FunFam | proline-rich receptor-like protein kinase PERK1 | 242 | 339 | - | - | |
Phac3g03978 | 608 | MobiDBLite | consensus disorder prediction | 1 | 107 | - | - | |
Phac3g03978 | 608 | ProSiteProfiles | Protein kinase domain profile. | 264 | 524 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac3g03978 | 608 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 384 | 396 | IPR008271 | GO:0004672|GO:0006468 | |
Phac3g03978 | 608 | SUPERFAMILY | Protein kinase-like (PK-like) | 244 | 536 | IPR011009 | - | |
Phac3g03978 | 608 | Gene3D | Transferase(Phosphotransferase) domain 1 | 340 | 551 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac3g03978 | Phac-Chr3 | 39417554 | 39421430 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac3g03978 | 105 | 601 | Trihelix Transcription Factor Family | AT1G70460 | 50.296 | 1.52e-151 | 451 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-1 | Phac3g03978 | PK_Tyr_Ser-Thr | 9.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac3g03978 | - | - | gmx:100805872 | 825.469 |