Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03978 ATGTCTTCCCCTAATAAGAAATCAGCTCCCCATAACAACACACCCGATAACGCCACCCCCGATGACGCCACCCCCGATAACGCCACTCCCGACAATGCCATACCCGACAATGCCACGCCCGACAATGCCACACCCGACAATGCCACGCCCGACAATGCCACGCCCGACAATGCCACGCCCGACAATGCCACGCCCGATAATTCAAACGGATCACATAAGGGTTCCTCATCGTCGTCGTCGTCGTCGTCCACTCCTTCAGCCAAAGAGCCGCACAAAGCGCTGTCGCATGAAAGGATGTCGAATACAGAGAAAGACAATGGTGGCACCGATAAAGCAGCATTGGGAGCTGGGATTGGAGTTGGGTTTGTCCTTCTCGTGTTGATCATTGTGTGTTTTATTTGGTGTTGCAGGAGGAAGAAGCGAAAGCAGAAGAAGTTCTACTACGCATCTCCTTCTAAAGGAAAAGGCAATTATTACAACACTGGGCAAAATTCTCTCCCTAAATGGCAACAAGGACCGGGTCCTCTCGGGAATGACCATGTGGTGAGGGTTCAACAACAAGGGATGGGGATGCAGATGGGAATGGGAATGCAGATGGGAATGGGAATGGGAATGGGTCCTCCTAGTGGTGGTGGTGGTGGTGGCTGGGGTACATCCCATCCCCAAATGAGCAGTGGTGATATGAGCTCTAATTACTCAGTGGGAATGGGTTCCACATCGCCAGGCCTTTCTCTCACACTCAAGGGTGGTACCTTCACTTATGAGGAGCTAGCAGCTGCCACCAAAGGATTTGCCAATGACCAGATTATTGGACAAGGTGGCTTTGGCTATGTCCATAAGGGAGTTTTACCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTAAAAGCAGGTAGTGGACAAGGAGAACGCGAGTTCCAAGCTGAGATTGACATCATTAGTCGAGTTCATCATCGTCATCTTGTGTCACTTGTTGGATATTGCATTTGTGGAGGCCAAAGAATGTTGGTCTATGAATTTGTTCCCAACTCAACTTTGGAACATCACCTTCATGGAAAAGGTATGCCTACCATGGATTGGCCTACTAGAATGCGAATTGCAATGGGATCTGCCAAAGGGCTTGCCTACCTTCATGAAGATTGTAGCCCTCGCATTATCCATCGTGACATTAAAGCTTCTAACGTTCTTCTTGATGATAGCTTTGAAGCAAAGGTGTCTGATTTTGGACTCGCAAAGTTGACCTCTGATAATAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGGTACTTGGCCCCAGAATACGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTCATGCTATTGGAACTCATAACCGGGAAACGGCCTGTAGATTCGTCAAATGTCATGGAGGACAGTTTAGTGGATTGGGCTCGACCACTCCTGAATAAAGGATTGGAGGATGGCAACTTTGGAGGGTTGGTGGATCCATTTTTGGAAGGCAACTACAATACCCAGGAAATGACAAGAATGGCAGCTTGCGCAGCTGCAAGCATTCGTCATTCGGCTAGGAAGCGTTCAAAAATGAGCCAGATTGTGAGAGCGCTGGAAGGAGATGTGTCATTGGAAGACTTGAAAGAAGGAACGAAACTTGCAGGGAATGGGAATAATGGGAATAGCAGTGCTTTCATTTCTTCATCTGGAAGCTCAGAATATGATACCATGCAATACAATGCTGATATGATTAAGTTCAGACAGGCAATAATGTCGAGCCAAGAATTTAATGACAGTGGTGAGCTTTCCAGTAAGGAGATGGCTTATCATTAG 1827 0.4735 MSSPNKKSAPHNNTPDNATPDDATPDNATPDNAIPDNATPDNATPDNATPDNATPDNATPDNATPDNSNGSHKGSSSSSSSSSTPSAKEPHKALSHERMSNTEKDNGGTDKAALGAGIGVGFVLLVLIIVCFIWCCRRKKRKQKKFYYASPSKGKGNYYNTGQNSLPKWQQGPGPLGNDHVVRVQQQGMGMQMGMGMQMGMGMGMGPPSGGGGGGWGTSHPQMSSGDMSSNYSVGMGSTSPGLSLTLKGGTFTYEELAAATKGFANDQIIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCICGGQRMLVYEFVPNSTLEHHLHGKGMPTMDWPTRMRIAMGSAKGLAYLHEDCSPRIIHRDIKASNVLLDDSFEAKVSDFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDSSNVMEDSLVDWARPLLNKGLEDGNFGGLVDPFLEGNYNTQEMTRMAACAAASIRHSARKRSKMSQIVRALEGDVSLEDLKEGTKLAGNGNNGNSSAFISSSGSSEYDTMQYNADMIKFRQAIMSSQEFNDSGELSSKEMAYH* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03978 608 FunFam Proline-rich receptor-like protein kinase PERK1 340 547 - -
Phac3g03978 608 MobiDBLite consensus disorder prediction 90 105 - -
Phac3g03978 608 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 122 587 IPR047117 -
Phac3g03978 608 Pfam Protein tyrosine and serine/threonine kinase 267 467 IPR001245 GO:0004672|GO:0006468
Phac3g03978 608 MobiDBLite consensus disorder prediction 159 178 - -
Phac3g03978 608 MobiDBLite consensus disorder prediction 1 89 - -
Phac3g03978 608 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Phac3g03978 608 SMART serkin_6 264 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03978 608 Gene3D Phosphorylase Kinase; domain 1 238 339 - -
Phac3g03978 608 FunFam proline-rich receptor-like protein kinase PERK1 242 339 - -
Phac3g03978 608 MobiDBLite consensus disorder prediction 1 107 - -
Phac3g03978 608 ProSiteProfiles Protein kinase domain profile. 264 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03978 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Phac3g03978 608 SUPERFAMILY Protein kinase-like (PK-like) 244 536 IPR011009 -
Phac3g03978 608 Gene3D Transferase(Phosphotransferase) domain 1 340 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03978 Phac-Chr3 39417554 39421430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03978 105 601 Trihelix Transcription Factor Family AT1G70460 50.296 1.52e-151 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phac3g03978 PK_Tyr_Ser-Thr 9.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03978 - - gmx:100805872 825.469