Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03973 ATGACGGTTGATTTGGACAACGTTTCCACAGCGTCAGGGGAAGCAAGCATCTCTTCCTCTGGCAATCAAACAAAACCCACTCCCAAGAGAAAACGAAACCTCCCTGGCATGCCAGATCCTGAGGCAGAGGTGATTGCTTTGTCGCCGAAGACGCTGTTGGCGACGAACCGGTTCGTGTGCGAGATATGCAACAAAGGATTTCAGAGGGACCAGAATCTGCAGCTTCATCGGAGAGGTCACAACTTGCCGTGGAAGCTGAGGCAGAGGTCCACCAAGGAGGTAAGGAAGAGAGTGTACGTGTGTCCCGAACCAGCGTGCGTGCACCACGACCCTTCTAGAGCCTTGGGGGACTTGACGGGGATCAAGAAGCACTTCTGCAGAAAGCACTGTGAGAAGAAGTGGAAATGCGACAAATGCTCCAAGAAATACGCCGTTCAGTCGGATTGGAAAGCGCACTCCAAAGTCTGCGGCAATAGAGAGTATAAGTGCGATTGCGGAACCGTTTTCTCCAGGAGGGATAGCTTCATTACTCATAGAGCGTTTTGCGATGCGTTGGCGAAGGAGAGTGTGAGATCTCGCACTGATGTTACCAAGGCTAATGAGGAAAACGATTCAAAGGTCTTAACCGACTCACCGCCGCCGGAGGTGGCGGCGGCTACAGGCACCAGCCCTGCGCAGTCAAACAGTGCCATATCTTCTGGTGTGCAGACGCAGAACCCAGAGTTGCCAGAAAATAATATCCCACAAGTCACTGCTGAGGAGCCACAAGCTATTACTGCTATAAGTGGGAGTGGGAGCTGTGGCAGCAACAGTAGTACCAATTCCTCAACAAGCAATGGTGGTGCTACTAGTAATAGTAACAGTAGTAGTATGTTTGCAAGTTTGTTTGCTTCTTCAACATCATCTGGGACTCAACAATCTCAAACACCAGCATTCAGTGACTTAGTTAGAGCCATGGGGCCTCCAGATCACCATGCAGACATCTCAGCTCCCTCTTCATCTGAGGCCATATCTCTTTGCCTCTCCACCAGTAATGCCTCACCAATATTTGCAACAGGAGGGCAGGAGCACCGGCAGTATGCCTCGCCTCCACAACCAGCCATGTCAGCCACAGCATTGCTGCAGAAAGCTGCTCAAATGGGTGCTGCAGCCACAAATTCCTCTCTGCTTCGCGGTTTTGGCATTGTGTCGTCATCTTCAGCTTCAACTTCAACTTCATCAGGCCAGCAAAATGGCCTGCAATGGGGTCAGCCTCAGTTAGAATCTGAGAGTGGCTCGGTTCCTGCAGCGCTTGGACTTAGTCTTCCATGTGATGGTGATTCTGGACTGAACGAATTGATGATGGGAACACCCTCAATGTTTGGTCCTAAACACACAACTCTTGATTTTCTAGGATTAGGGATGGCTGCTGGTGGAGGCTTATCTGCCCTCATCACATCTATTGGTGGTGGTTTGGATGTTACTGCTGCAGCTGCAGCAGCAACCTTTGGTAATGGGGAATTTTCTGGCAAAGATATTGAAAGGAGGAGCTCTTGA 1536 0.5046 MTVDLDNVSTASGEASISSSGNQTKPTPKRKRNLPGMPDPEAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKRVYVCPEPACVHHDPSRALGDLTGIKKHFCRKHCEKKWKCDKCSKKYAVQSDWKAHSKVCGNREYKCDCGTVFSRRDSFITHRAFCDALAKESVRSRTDVTKANEENDSKVLTDSPPPEVAAATGTSPAQSNSAISSGVQTQNPELPENNIPQVTAEEPQAITAISGSGSCGSNSSTNSSTSNGGATSNSNSSSMFASLFASSTSSGTQQSQTPAFSDLVRAMGPPDHHADISAPSSSEAISLCLSTSNASPIFATGGQEHRQYASPPQPAMSATALLQKAAQMGAAATNSSLLRGFGIVSSSSASTSTSSGQQNGLQWGQPQLESESGSVPAALGLSLPCDGDSGLNELMMGTPSMFGPKHTTLDFLGLGMAAGGGLSALITSIGGGLDVTAAAAAATFGNGEFSGKDIERRSS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03973 511 MobiDBLite consensus disorder prediction 400 424 - -
Phac3g03973 511 Gene3D Classic Zinc Finger 38 104 - -
Phac3g03973 511 MobiDBLite consensus disorder prediction 1 29 - -
Phac3g03973 511 MobiDBLite consensus disorder prediction 400 426 - -
Phac3g03973 511 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Phac3g03973 511 FunFam protein indeterminate-domain 12-like 37 105 - -
Phac3g03973 511 SMART c2h2final6 134 154 IPR013087 -
Phac3g03973 511 SMART c2h2final6 99 129 IPR013087 -
Phac3g03973 511 SMART c2h2final6 58 80 IPR013087 -
Phac3g03973 511 MobiDBLite consensus disorder prediction 220 246 - -
Phac3g03973 511 SUPERFAMILY beta-beta-alpha zinc fingers 57 154 IPR036236 -
Phac3g03973 511 FunFam protein indeterminate-domain 5, chloroplastic-like 112 191 - -
Phac3g03973 511 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 14 473 IPR031140 -
Phac3g03973 511 Gene3D Classic Zinc Finger 112 192 - -
Phac3g03973 511 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Phac3g03973 511 MobiDBLite consensus disorder prediction 192 246 - -
Phac3g03973 511 MobiDBLite consensus disorder prediction 260 287 - -
Phac3g03973 511 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03973 Phac-Chr3 39363047 39366571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03973 1 510 IDZ Gene Family AT5G66730 54.792 2.82e-174 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g03973 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03973 K25869 - gmx:100783947 716.842