Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03965 ATGGGGGCTGGGGAAGAGAGCACAACAAAATCTTCTAAGTCATCTTCATCAGTTCAGGAGACCCCAACAGTGCCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATGCTCCTGGAGCTGCTCCACCTCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTATTTATGGGGAAGCCAGCATCCTTTGATGCCACCATATGGGACTCATGTCCCATATCCAGCTTTATATCCTCCTGGGAGTATCTATGCTCATCCAAGCATGGCAGTGACTCCGAGTGTTGTCCAGCAAAGTACGGAGATTGAAGGGAAGGGAGCTGATGGAAAGGATCGAGACTCGTCCAAAAAATTGAAAGGAACTTCTGCAAATGCAGGTTCCAAAGCAGCTGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATGTCGCAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCGAATGCTAGTGATGAGAATAATAACCAACAGGAATCAGCAACAAACAAGAAGGGAAGCTTTGACCTGATGCTTGTTGATGGAGCCAATGCCCAGAACAATTCTGCGGGTGCCATTTCTCAATCTTCTATGCCTGGAAAGCCTGTTGTCTCAATGCCAGCAACTAATCTTAATATTGGAATGGACTTATGGAATGCATCATCTGGTGGTGGCGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCAGGAGTTGTTGCCCTTGGCGAACAATGGATACAAGATGAACGTGAGCTGAAAAGACAGAAGAGAAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGGTTACGCAAGCAGGCTGAGTGCGAAGACTTACAAAAGAGGGTGGAGTCACTGGGAAGTGAGAATCGAACACTCAGAGAAGAGCTTCAGAGACTTTCCGAAGAATGCGAGAAGCTTACATCTGAAAATAGTTCAATCAAGGAGGAATTGGAACGGATGTGTGGGCCAGAAGCAGTTGCTAACCTTGGATGA 1017 0.4739 MGAGEESTTKSSKSSSSVQETPTVPAYPDWSSSMQAYYAPGAAPPPFFASTVASPTPHPYLWGSQHPLMPPYGTHVPYPALYPPGSIYAHPSMAVTPSVVQQSTEIEGKGADGKDRDSSKKLKGTSANAGSKAAESGKAGSGSGNDGMSQSGESGSEGSSNASDENNNQQESATNKKGSFDLMLVDGANAQNNSAGAISQSSMPGKPVVSMPATNLNIGMDLWNASSGGGEAAKMRHNQSGAPGVVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEDLQKRVESLGSENRTLREELQRLSEECEKLTSENSSIKEELERMCGPEAVANLG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03965 338 SUPERFAMILY Leucine zipper domain 259 315 IPR046347 GO:0003700|GO:0006355
Phac3g03965 338 CDD bZIP_plant_GBF1 261 311 IPR045314 GO:0003700|GO:0006355
Phac3g03965 338 Gene3D - 259 313 - -
Phac3g03965 338 MobiDBLite consensus disorder prediction 258 284 - -
Phac3g03965 338 Pfam bZIP transcription factor 256 318 IPR004827 GO:0003700|GO:0006355
Phac3g03965 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Phac3g03965 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 321 IPR004827 GO:0003700|GO:0006355
Phac3g03965 338 MobiDBLite consensus disorder prediction 1 29 - -
Phac3g03965 338 MobiDBLite consensus disorder prediction 311 329 - -
Phac3g03965 338 Coils Coil 269 324 - -
Phac3g03965 338 MobiDBLite consensus disorder prediction 142 177 - -
Phac3g03965 338 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Phac3g03965 338 MobiDBLite consensus disorder prediction 96 187 - -
Phac3g03965 338 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Phac3g03965 338 MobiDBLite consensus disorder prediction 311 338 - -
Phac3g03965 338 FunFam BZIP transcription factor 258 309 - -
Phac3g03965 338 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 334 IPR044827 GO:0003700|GO:0006355|GO:0043565
Phac3g03965 338 MobiDBLite consensus disorder prediction 108 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03965 Phac-Chr3 39295833 39301634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03965 1 337 bZIP Transcription Factor Family AT4G36730 54.277 6.48e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac3g03965 MFMR 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03965 K09060 - gmx:778124 565.074